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探索多取代苯甲醛衍生物中的分子间相互作用:X射线、 Hirshfeld表面和晶格能分析

Exploring intermolecular contacts in multi-substituted benzaldehyde derivatives: X-ray, Hirshfeld surface and lattice energy analyses.

作者信息

Hulushe Siya T, Manyeruke Meloddy H, Louzada Marcel, Rigin Sergei, Hosten Eric C, Watkins Gareth M

机构信息

Department of Chemistry, Rhodes University P.O. Box 94 Grahamstown 6139 South Africa

Department of Chemistry, New Mexico Highlands University Las Vegas New Mexico 87701 USA.

出版信息

RSC Adv. 2020 Apr 29;10(29):16861-16874. doi: 10.1039/c9ra10752e.

Abstract

Crystal structures of six benzaldehyde derivatives (1-6) have been determined and their supramolecular networks were established by an X-ray crystallographic study. The study has shown that the compounds are linked by various intermolecular interactions such as weak C-H⋯O hydrogen bonding, and C-H⋯π, π-π and halogen bonding interactions which consolidate and strengthen the formation of these molecular assemblies. The carbonyl group generates diverse synthons in 1-6 intermolecular C-H⋯O hydrogen bonds. An interplay of C-H⋯O hydrogen bonds, and C-H⋯π and π-π stacking interactions facilitates the formation of multi-dimensional supramolecular networks. Crystal packings in 4 and 5 are further generated by type I halogen⋯halogen bonding interactions. The differences in crystal packing are represented by variation of substitution positions in the compounds. Structure 3 is isomorphous with 4 but there are subtle differences in their crystal packing. The nature of intermolecular contacts in the structures has been studied through the Hirshfeld surfaces and two-dimensional fingerprint plots which serve as a comparison in constructing different supramolecular networks. The intermolecular interaction energies are quantified utilizing theorectical calculations for the title compounds and various analogous structures retrieved from the Cambridge Structural Database (CSD). Also intermolecular interactions for the molecular pairs are exctrated from respective crystal structures. Essentially, there are some invariant and variable intermolecular contacts realized between different groups in all six structures. The DFT total lattice energy ( ) calculations showed a direct correlation with thermal strengths of the title compounds.

摘要

已测定了六种苯甲醛衍生物(1-6)的晶体结构,并通过X射线晶体学研究建立了它们的超分子网络。研究表明,这些化合物通过各种分子间相互作用相连,如弱的C-H⋯O氢键、C-H⋯π、π-π和卤键相互作用,这些相互作用巩固并加强了这些分子聚集体的形成。羰基在1-6分子间C-H⋯O氢键中产生多种合成子。C-H⋯O氢键、C-H⋯π和π-π堆积相互作用的相互作用促进了多维超分子网络的形成。4和5中的晶体堆积进一步由I型卤⋯卤键相互作用产生。晶体堆积的差异由化合物中取代位置的变化表示。结构3与4同构,但它们的晶体堆积存在细微差异。通过Hirshfeld表面和二维指纹图谱研究了结构中分子间接触的性质,这些图谱在构建不同的超分子网络时可作为比较。利用理论计算对标题化合物和从剑桥结构数据库(CSD)检索到的各种类似结构的分子间相互作用能进行了量化。此外,还从各自的晶体结构中提取了分子对的分子间相互作用。本质上,在所有六种结构的不同基团之间实现了一些不变和可变的分子间接触。DFT总晶格能( )计算表明与标题化合物的热强度直接相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2428/9053169/00a9ff37ce5a/c9ra10752e-f1.jpg

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