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基于结构光成像的三维小麦籽粒及腹沟性状智能分析方法

An Intelligent Analysis Method for 3D Wheat Grain and Ventral Sulcus Traits Based on Structured Light Imaging.

作者信息

Huang Chenglong, Qin Zhijie, Hua Xiangdong, Zhang Zhongfu, Xiao Wenli, Liang Xiuying, Song Peng, Yang Wanneng

机构信息

College of Engineering, Huazhong Agricultural University, Wuhan, China.

National Key Laboratory of Crop Genetic Improvement, National Center of Plant Gene Research, Huazhong Agricultural University, Wuhan, China.

出版信息

Front Plant Sci. 2022 Apr 13;13:840908. doi: 10.3389/fpls.2022.840908. eCollection 2022.

Abstract

The wheat grain three-dimensional (3D) phenotypic characters are of great significance for final yield and variety breeding, and the ventral sulcus traits are the important factors to the wheat flour yield. The wheat grain trait measurements are necessary; however, the traditional measurement method is still manual, which is inefficient, subjective, and labor intensive; moreover, the ventral sulcus traits can only be obtained by destructive measurement. In this paper, an intelligent analysis method based on the structured light imaging has been proposed to extract the 3D wheat grain phenotypes and ventral sulcus traits. First, the 3D point cloud data of wheat grain were obtained by the structured light scanner, and then, the specified point cloud processing algorithms including single grain segmentation and ventral sulcus location have been designed; finally, 28 wheat grain 3D phenotypic characters and 4 ventral sulcus traits have been extracted. To evaluate the best experimental conditions, three-level orthogonal experiments, which include rotation angle, scanning angle, and stage color factors, were carried out on 125 grains of 5 wheat varieties, and the results demonstrated that optimum conditions of rotation angle, scanning angle, and stage color were 30°, 37°, black color individually. Additionally, the results also proved that the mean absolute percentage errors (MAPEs) of wheat grain length, width, thickness, and ventral sulcus depth were 1.83, 1.86, 2.19, and 4.81%. Moreover, the 500 wheat grains of five varieties were used to construct and validate the wheat grain weight model by 32 phenotypic traits, and the cross-validation results showed that the of the models ranged from 0.77 to 0.83. Finally, the wheat grain phenotype extraction and grain weight prediction were integrated into the specialized software. Therefore, this method was demonstrated to be an efficient and effective way for wheat breeding research.

摘要

小麦籽粒的三维(3D)表型特征对最终产量和品种选育具有重要意义,而腹沟性状是影响小麦出粉率的重要因素。对小麦籽粒性状进行测量很有必要;然而,传统的测量方法仍然是人工操作,效率低、主观性强且劳动强度大;此外,腹沟性状只能通过破坏性测量获得。本文提出了一种基于结构光成像的智能分析方法,用于提取小麦籽粒的3D表型和腹沟性状。首先,通过结构光扫描仪获取小麦籽粒的3D点云数据,然后设计了包括单粒分割和腹沟定位在内的特定点云处理算法;最后,提取了28个小麦籽粒3D表型特征和4个腹沟性状。为了评估最佳实验条件,对5个小麦品种的125粒种子进行了包括旋转角度、扫描角度和载物台颜色因素的三水平正交实验,结果表明旋转角度、扫描角度和载物台颜色的最佳条件分别为30°、37°和黑色。此外,结果还证明了小麦籽粒长度、宽度、厚度和腹沟深度的平均绝对百分比误差(MAPE)分别为1.83%、1.86%、2.19%和4.81%。此外,利用5个品种的500粒小麦种子,通过32个表型性状构建并验证了小麦粒重模型,交叉验证结果表明模型的 范围为0.77至0.83。最后,将小麦籽粒表型提取和粒重预测集成到专门软件中。因此,该方法被证明是小麦育种研究的一种有效途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b7fa/9044079/122b055c724b/fpls-13-840908-g001.jpg

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