VirMine 2.0：识别微生物群落中的病毒序列。
virMine 2.0: Identifying Viral Sequences in Microbial Communities.
作者信息
Johnson Genevieve, Putonti Catherine
机构信息
Bioinformatics Program, Loyola University Chicago, Chicago, Illinois, USA.
Department of Biology, Loyola University Chicago, Chicago, Illinois, USA.
出版信息
Microbiol Resour Announc. 2022 May 19;11(5):e0010722. doi: 10.1128/mra.00107-22. Epub 2022 May 2.
Abstract
Here, we present virMine 2.0, the next generation of the virMine software tool. virMine 2.0 uses an exclusion technique to remove nonviral data from sequencing reads and scores the remaining data based on relatedness to viral elements, eliminating the sole dependency on homology identification.
摘要
在此，我们展示了virMine 2.0，即下一代virMine软件工具。virMine 2.0使用一种排除技术从测序读数中去除非病毒数据，并根据与病毒元件的相关性对剩余数据进行评分，消除了对同源性鉴定的唯一依赖。
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