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XX中该基因家族的特征与表达 (注:原文中“in.”部分信息缺失,这里是根据已有内容的意译)

Characterization and expression of the gene family in .

作者信息

Brunetti Sabrina C, Arseneault Michelle K M, Gulick Patrick J

机构信息

Department of Biology, Concordia University, 7141 Sherbrooke W., Montreal, QC H4B 1R6, Canada.

出版信息

Genome. 2022 Jun 1;65(6):349-362. doi: 10.1139/gen-2021-0094. Epub 2022 May 3.

Abstract

Pirins are nuclear bicupin proteins, encoded by genes that are one of several gene families that comprise the cupin superfamily in plants. genes have been implicated in stress response pathways studied in Arabidopsis and At- has been shown to interact with the heterotrimeric G-protein alpha subunit (GPA1). The aim of this study was to identify the members of the gene family in to correct their annotations in the whole genome, and gain an insight into their tissue-specific expression as well as their response to abiotic and biotic stresses. The gene family in is comprised of 18 genes that represent six paralogous gene copies, each having an A, B, and D homeolog. Expression analysis of the genes in Illumina RNA-seq libraries, which included sampling from differing tissue types as well as abiotic and biotic stresses, indicates that the members of the gene family have specialized expression and play a role in stress responses. gene families are also identified in other monocots including , and the dicot

摘要

梨蛋白是核双杯状蛋白,由基因编码,这些基因是植物中构成杯状蛋白超家族的几个基因家族之一。这些基因与拟南芥中研究的应激反应途径有关,并且已证明At-与异源三聚体G蛋白α亚基(GPA1)相互作用。本研究的目的是鉴定水稻中该基因家族的成员,校正其在全基因组中的注释,并深入了解它们的组织特异性表达以及对非生物和生物胁迫的反应。水稻中的该基因家族由18个基因组成,代表六个旁系同源基因拷贝,每个拷贝都有一个A、B和D同源基因。对水稻Illumina RNA-seq文库中这些基因的表达分析,包括从不同组织类型以及非生物和生物胁迫中取样,表明该基因家族的成员具有特异性表达,并在应激反应中发挥作用。在包括玉米在内的其他单子叶植物以及双子叶植物中也鉴定出了该基因家族。

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