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环介导等温扩增结合基于纳米颗粒的侧向流生物传感器检测流感嗜血杆菌。

Detection of Haemophilus influenzae by loop-mediated isothermal amplification coupled with nanoparticle-based lateral flow biosensor assay.

机构信息

Biomedical Informatics & Genomics Center, Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, Shaanxi, 710049, China.

Qingdao Haier Biotech Co. Ltd, Qingdao, 266109, China.

出版信息

BMC Microbiol. 2022 May 5;22(1):123. doi: 10.1186/s12866-022-02547-5.

Abstract

BACKGROUND

Haemophilus influenzae was the most aggressive pathogen and formed a major cause of bacterial meningitis and pneumonia in young children and infants, which need medical emergency requiring immediate diagnosis and treatment. However, From isolation to identification of H. influenzae, the traditional diagnose strategy was time-consuming and expensive. Therefore, the establishment of a convenient, highly sensitive, and stable detection system is urgent and critical.

RESULTS

In this study, we used a combined method to detect H. influenzae. Six specific primers were designed on the basis of outer membrane protein P6 gene sequence of H. influenzae. The reaction condition such as the optimum temperature was 65℃, and the optimum reaction time was 30 min, respectively. Through the loop-mediated isothermal amplification (LAMP) in combination with nanoparticle-based lateral flow biosensor (LFB), the sensitivity of LAMP-LFB showed 100 fg was the lowest genomic DNA templates concentration in the pure cultures. Meanwhile, the specificity of H. influenzae-LAMP-LFB assay showed the exclusive positive results, which were detected in H. influenzae templates. In 55 clinical sputum samples, 22 samples were positive with LAMP-LFB method, which was in accordance with the traditional culture and Polymerase Chain Reaction (PCR) method. The accuracy in diagnosing H. influenzae with LAMP-LFB could reach 100%, compared to culture and PCR method, indicating the LAMP-LFB had more advantages in target pathogen detection.

CONCLUSIONS

Taken together, LAMP-LFB could be used as an effective diagnostic approach for H. influenzae in the conditions of basic and clinical labs, which would allow clinicians to make better informed decisions regarding patient treatment without delay.

摘要

背景

流感嗜血杆菌是最具侵袭性的病原体,是导致婴幼儿细菌性脑膜炎和肺炎的主要原因,需要立即进行医疗急救并诊断和治疗。然而,从分离到鉴定流感嗜血杆菌,传统的诊断策略既耗时又昂贵。因此,建立一种方便、高敏感、稳定的检测系统是紧迫和关键的。

结果

在本研究中,我们使用了一种联合方法来检测流感嗜血杆菌。根据流感嗜血杆菌外膜蛋白 P6 基因序列设计了 6 个特异性引物。反应条件如最适温度为 65℃,最适反应时间分别为 30 分钟。通过环介导等温扩增(LAMP)与纳米颗粒侧向流动生物传感器(LFB)相结合,LAMP-LFB 的灵敏度在纯培养物中最低基因组 DNA 模板浓度为 100 fg。同时,流感嗜血杆菌 LAMP-LFB 检测方法的特异性显示出独特的阳性结果,仅在流感嗜血杆菌模板中检测到。在 55 份临床痰样本中,22 份样本用 LAMP-LFB 法检测为阳性,与传统培养和聚合酶链反应(PCR)法一致。与培养和 PCR 法相比,LAMP-LFB 诊断流感嗜血杆菌的准确率达到 100%,表明 LAMP-LFB 在检测靶病原体方面具有更多优势。

结论

综上所述,LAMP-LFB 可作为基础和临床实验室中检测流感嗜血杆菌的有效诊断方法,使临床医生能够在不延误的情况下更好地根据患者的治疗情况做出决策。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/febe/9074365/3506f1796009/12866_2022_2547_Fig1_HTML.jpg

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