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利用基于神经网络的分子动力学模拟探索复杂反应网络。

Exploring Complex Reaction Networks Using Neural Network-Based Molecular Dynamics Simulation.

机构信息

State Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, Beijing 100081, China.

Explosion Protection and Emergency Disposal Technology Engineering Research Center of the Ministry of Education, Beijing 100081, China.

出版信息

J Phys Chem Lett. 2022 May 12;13(18):4052-4057. doi: 10.1021/acs.jpclett.2c00647. Epub 2022 May 6.

DOI:10.1021/acs.jpclett.2c00647
PMID:35522222
Abstract

molecular dynamics (AIMD) is an established method for revealing the reactive dynamics of complex systems. However, the high computational cost of AIMD restricts the explorable length and time scales. Here, we develop a fundamentally different approach using molecular dynamics simulations powered by a neural network potential to investigate complex reaction networks. This potential is trained via a workflow combining AIMD and interactive molecular dynamics in virtual reality to accelerate the sampling of rare reactive processes. A panoramic visualization of the complex reaction networks for decomposition of a novel high explosive (ICM-102) is achieved without any predefined reaction coordinates. The study leads to the discovery of new pathways that would be difficult to uncover if established methods were employed. These results highlight the power of neural network-based molecular dynamics simulations in exploring complex reaction mechanisms under extreme conditions at the level, pushing the limit of theoretical and computational chemistry toward the realism and fidelity of experiments.

摘要

分子动力学(AIMD)是揭示复杂体系反应动力学的一种成熟方法。然而,AIMD 的高计算成本限制了可探索的长度和时间尺度。在这里,我们开发了一种完全不同的方法,使用基于神经网络势的分子动力学模拟来研究复杂反应网络。该势通过结合 AIMD 和虚拟现实中交互式分子动力学的工作流程进行训练,以加速稀有反应过程的采样。通过这种方法,可以实现对新型高爆炸物(ICM-102)分解的复杂反应网络的全景可视化,而无需任何预设的反应坐标。研究发现了一些新的途径,如果采用传统方法,这些途径很难被发现。这些结果突出了基于神经网络的分子动力学模拟在极端条件下探索复杂反应机制的强大功能,推动了理论和计算化学在实验的真实性和准确性方面的极限。

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