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通过链霉菌中的异源表达理解和操纵装配线生物合成。

Understanding and Manipulating Assembly Line Biosynthesis by Heterologous Expression in Streptomyces.

机构信息

Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, Hangzhou, Zhejiang Province, China.

Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, Japan.

出版信息

Methods Mol Biol. 2022;2489:223-238. doi: 10.1007/978-1-0716-2273-5_12.

Abstract

Assembly line enzymes, including polyketide synthases and nonribosomal peptide synthetases, play central roles in the construction of complex natural products. Due to the sequential biochemistry processed in each domain, the domain architecture of the assembly line enzymes strictly correlates with the product molecule. This colinearity makes assembly line enzymes an ideal target for rational reprogramming. Although many of the past engineering attempts suffered from decreased product yield, recent advancements in the bioinformatic analysis and engineering design now provide new opportunity to work on these modular megaenzymes. This chapter describes the methods for analyzing and engineering the assembly line enzymes, including module and domain analysis needed for designing the engineering of assembly line biosynthesis, and the expression vector construction with an example of two-vector heterologous expression system in Streptomyces.

摘要

装配线酶,包括聚酮合酶和非核糖体肽合酶,在复杂天然产物的构建中起着核心作用。由于在每个结构域中进行顺序生物化学处理,装配线酶的结构域架构与产物分子严格相关。这种共线性使装配线酶成为理性重编程的理想目标。尽管过去的许多工程尝试都因产物产量下降而失败,但生物信息分析和工程设计的最新进展现在为这些模块化的大型酶提供了新的机会。本章介绍了分析和工程装配线酶的方法,包括用于设计装配线生物合成工程的模块和结构域分析,以及带有链霉菌中两载体异源表达系统实例的表达载体构建。

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