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生物膜中细胞外DNA与胞外多糖分子相互作用的物理化学及生物学见解

Physicochemical and Biological Insights Into the Molecular Interactions Between Extracellular DNA and Exopolysaccharides in Biofilms.

作者信息

Wang Yan, Li Tingyi, Xue Weiwei, Zheng Yue, Wang Yipeng, Zhang Ning, Zhao Yue, Wang Jing, Li Yuezhong, Wang Chuandong, Hu Wei

机构信息

State Key Laboratory of Microbial Technology, Microbial Technology Institute, Shandong University, Qingdao, China.

College of Pharmaceutical Science, Shandong University of Traditional Chinese Medicine, Jinan, China.

出版信息

Front Microbiol. 2022 Apr 22;13:861865. doi: 10.3389/fmicb.2022.861865. eCollection 2022.

Abstract

Extracellular DNA (eDNA) is a critical component in the extracellular matrix (ECM) of bacterial biofilms, while little is known about the mechanisms underlying how eDNA integrates into the ECM through potential macromolecular interactions. biofilm was employed as a suitable model for the investigation due to the co-distribution of eDNA and exopolysaccharides (EPS) owing to their direct interactions in the ECM. DNA is able to combine with EPS to form a macromolecular conjugate, which is dominated by the electrostatic forces participating in the polymer-polymer interactions. Without intercalation binding, DNA-EPS interactions exhibit a certain degree of reversibility. Acting as a strong extracellular framework during biofilm formation process, the eDNA-EPS complex not only facilitates the initial cell adhesion and subsequent establishment of ECM architecture, but also renders cells within biofilms stress resistances that are relevant to the survival of in some hostile environments. Furthermore, the EPS protects the conjugated DNA from the degradation by nucleic acid hydrolases, which leads to the continuous and stable existence of eDNA in the native ECM of biofilms. These results will shed light on developing prevention and treatment strategies against biofilm-related risks.

摘要

细胞外DNA(eDNA)是细菌生物膜细胞外基质(ECM)的关键组成部分,然而,关于eDNA如何通过潜在的大分子相互作用整合到ECM中的潜在机制,人们却知之甚少。由于eDNA和胞外多糖(EPS)在ECM中存在直接相互作用且共同分布,因此生物膜被用作合适的研究模型。DNA能够与EPS结合形成大分子共轭物,这种结合主要由参与聚合物-聚合物相互作用的静电力主导。在没有嵌入结合的情况下,DNA-EPS相互作用表现出一定程度的可逆性。在生物膜形成过程中,eDNA-EPS复合物作为一种强大的细胞外框架,不仅促进了初始细胞粘附以及随后ECM结构的建立,还赋予生物膜内的细胞抗逆性,这与在某些恶劣环境中的生存相关。此外,EPS保护共轭DNA不被核酸水解酶降解,这使得eDNA在生物膜的天然ECM中持续稳定存在。这些结果将为制定针对生物膜相关风险的预防和治疗策略提供线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d11/9073016/6227c017a9f7/fmicb-13-861865-g001.jpg

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