Suppr超能文献

南极海冰噬菌体的病毒-宿主相互作用和遗传多样性。

Virus-Host Interactions and Genetic Diversity of Antarctic Sea Ice Bacteriophages.

机构信息

Molecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinkigrid.7737.4, Helsinki, Finland.

Department of Microbiology, Faculty of Agriculture and Forestry, University of Helsinkigrid.7737.4, Helsinki, Finland.

出版信息

mBio. 2022 Jun 28;13(3):e0065122. doi: 10.1128/mbio.00651-22. Epub 2022 May 9.

Abstract

Although we know the generally appreciated significant roles of microbes in sea ice and polar waters, detailed studies of virus-host systems from such environments have been so far limited by only a few available isolates. Here, we investigated infectivity under various conditions, infection cycles, and genetic diversity of the following Antarctic sea ice bacteriophages: Antarctic GD virus 1 (PANV1), Antarctic JLT virus 2 (PANV2), Antarctic BD virus 1 (OANV1), and Antarctic DB virus 2 (OANV2). The phages infect common sea ice bacteria belonging to the genera or . Although the phages are marine and cold-active, replicating at 0°C to 5°C, they all survived temporal incubations at ≥30°C and remained infectious without any salts or supplemented only with magnesium, suggesting a robust virion assembly maintaining integrity under a wide range of conditions. Host recognition in the cold proved to be effective, and the release of progeny viruses occurred as a result of cell lysis. The analysis of viral genome sequences showed that nearly one-half of the gene products of each virus are unique, highlighting that sea ice harbors unexplored virus diversity. Based on predicted genes typical for tailed double-stranded DNA phages, we suggest placing the four studied viruses in the class . Searching against viral sequences from metagenomic assemblies, we revealed that related viruses are not restricted to Antarctica but are also found in distant marine environments. Very little is known about sea ice microbes despite the significant role played by sea ice in the global oceans as well as microbial input into biogeochemical cycling. Studies on the sea ice viruses have been typically limited to -omics-based approaches and microscopic examinations of sea ice samples. To date, only four cultivable viruses have been isolated from Antarctic sea ice. Our study of these unique isolates advances the understanding of the genetic diversity of viruses in sea ice environments, their interactions with host microbes, and possible links to other biomes. Such information contributes to more accurate future sea ice biogeochemical models.

摘要

虽然我们知道微生物在海冰和极地水域中具有普遍受到赞赏的重要作用,但迄今为止,对这些环境中病毒-宿主系统的详细研究仅限于少数可用的分离物。在这里,我们研究了以下南极海冰噬菌体在各种条件下的感染性、感染周期和遗传多样性:南极 GD 病毒 1(PANV1)、南极 JLT 病毒 2(PANV2)、南极 BD 病毒 1(OANV1)和南极 DB 病毒 2(OANV2)。这些噬菌体感染属于属的常见海冰细菌。尽管噬菌体是海洋和冷活性的,在 0°C 到 5°C 下复制,但它们都能在≥30°C 的时间孵育中存活下来,并在没有任何盐或仅补充镁的情况下保持感染性,这表明在广泛的条件下保持完整性的坚固病毒衣壳。在寒冷中宿主识别被证明是有效的,并且由于细胞裂解而释放出子代病毒。病毒基因组序列分析表明,每种病毒的近一半基因产物是独特的,这突出表明海冰蕴藏着未被探索的病毒多样性。根据典型的有尾双链 DNA 噬菌体的预测基因,我们建议将研究的四种病毒归入类。针对宏基因组组装中的病毒序列进行搜索,我们发现相关病毒不仅限于南极洲,而且也存在于遥远的海洋环境中。尽管海冰在全球海洋中发挥着重要作用,并且微生物对生物地球化学循环也有贡献,但人们对海冰微生物的了解仍然很少。对海冰病毒的研究通常仅限于基于组学的方法和对海冰样本的显微镜检查。迄今为止,仅从南极海冰中分离出四种可培养病毒。我们对这些独特分离物的研究增进了对海冰环境中病毒遗传多样性、它们与宿主微生物相互作用以及与其他生物群系可能联系的理解。这些信息有助于更准确地预测未来的海冰生物地球化学模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f08/9239159/8256af76aa07/mbio.00651-22-f001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验