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碳点介导的G-四链体纳米网络形成用于增强DNAzyme活性及实现催化剂的简易回收

Carbon dot mediated G quadruplex nano-network formation for enhanced DNAzyme activity and easy catalyst reclamation.

作者信息

Kumari Sonam, Mandal Saptarshi, Das Prolay

机构信息

Department of Chemistry, Indian Institute of Technology Patna Bihta Patna 801103 Bihar India

出版信息

RSC Adv. 2019 Dec 17;9(71):41502-41510. doi: 10.1039/c9ra08290e. eCollection 2019 Dec 13.

Abstract

The significant application potential of the DNAzyme activity of G-quadruplex (G4)-hemin complexes has prompted considerable research efforts to amplify their peroxidase mimicking activity to match that of their enzymatic counterparts. However, concurrent improvements in the catalytic cycle and catalyst recovery remain elusive. Herein, we report the creation of a network array of G-quadruplex (G4)-hemin complexes crosslinked by carbon quantum dots (CDs) that not only significantly improves the G-quadruplex-hemin DNAzyme activity, stability, and catalytic cycle, but also points towards easy catalyst regeneration a semi-heterogeneous catalysis approach. 5'-phosphate terminated G-rich single-stranded DNA molecules proficient in generating intermolecular and intramolecular G-quadruplexes were covalently conjugated to anthrarufin derived CDs through phosphoramidite chemistry. The network array was achieved through K mediated intermolecular G-quadruplex formation that readily complexes with hemin to give the catalytic core. The presence of CDs in close vicinity ensures a favorable microenvironment that helps in amplifying the DNAzyme activity in both the intermolecular CD-G-quadruplex network assembly and the intramolecular CD-G quadruplex conjugate, while the former is necessary for easy catalyst regeneration. The CD photophysics enable the monitoring of the DNAzyme recovery and reaction progress.

摘要

G-四链体(G4)-血红素复合物的DNAzyme活性具有显著的应用潜力,这促使人们开展了大量研究工作,以增强其过氧化物酶模拟活性,使其与天然酶相匹配。然而,在催化循环和催化剂回收方面同时取得改进仍然难以实现。在此,我们报道了一种由碳量子点(CDs)交联的G-四链体(G4)-血红素复合物网络阵列,它不仅显著提高了G-四链体-血红素DNAzyme的活性、稳定性和催化循环,还为催化剂的简易再生指明了方向——一种半非均相催化方法。通过亚磷酰胺化学将擅长形成分子间和分子内G-四链体的5'-磷酸末端富含G的单链DNA分子与源自红菌素的CDs共价连接。通过K介导的分子间G-四链体形成实现网络阵列,该分子间G-四链体很容易与血红素络合形成催化核心。紧邻的CDs的存在确保了一个有利的微环境,有助于在分子间CD-G-四链体网络组装和分子内CD-G四链体共轭物中放大DNAzyme活性,而前者对于催化剂的简易再生是必要的。CD的光物理性质能够监测DNAzyme的回收和反应进程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/029a/9076458/62b4de387cca/c9ra08290e-s1.jpg

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