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晚期新生儿败血症中的全球 DNA 低甲基化和 DNA 甲基转移酶基因表达谱。

Global DNA hypomethylation and the expression profile of DNA methyltransferase genes in late-onset neonatal sepsis.

机构信息

Department of Neonatology, Jawaharlal Institute of Postgraduate Medical Education & Research (JIPMER), Puducherry, 605011, India.

Department of Pediatrics, Jawaharlal Institute of Postgraduate Medical Education & Research (JIPMER), Puducherry, 605011, India.

出版信息

Epigenomics. 2022 Jun;14(11):671-682. doi: 10.2217/epi-2022-0040. Epub 2022 May 19.

Abstract

Infectious organisms tend to cause DNA methylation changes. Thus, this paper aims to study global DNA methylation and the expression of DNA methyltransferase (DNMT) genes in late-onset neonatal sepsis (LONS). Global and Alu DNA methylation and expression levels of DNMT were performed using 5mc ELISA, methylation-specific PCR and quantitative real-time-PCR, respectively for LONS and controls. Significant hypomethylation of global DNA and Alu DNA methylation and lower expression of and were observed in LONS compared with controls. Receiver operating characteristic analysis of global and Alu DNA methylation showed good discrimination for the identification of LONS. The hypomethylation of global DNA and Alu elements is evident in neonates with LONS. This may be clinically useful for the prognosis of LONS.

摘要

感染性生物往往会导致 DNA 甲基化的改变。因此,本研究旨在探讨晚发型新生儿败血症(LONS)中的全球 DNA 甲基化和 DNA 甲基转移酶(DNMT)基因的表达。采用 5mcELISA、甲基化特异性 PCR 和实时定量 PCR 分别检测 LONS 患儿和对照组的全球和 Alu 区 DNA 甲基化及 DNMT 表达水平。与对照组相比,LONS 患儿中观察到全球 DNA 和 Alu DNA 甲基化显著低甲基化,以及 和 表达水平降低。全球和 Alu DNA 甲基化的受试者工作特征曲线分析对 LONS 的识别具有良好的区分度。LONS 新生儿中存在全球 DNA 和 Alu 元件的低甲基化,这可能对 LONS 的预后具有临床意义。

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