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组中与次生代谢物途径及其相关生物合成基因簇相关的现状

Current status of secondary metabolite pathways linked to their related biosynthetic gene clusters in section .

作者信息

Wang Xinhui, Jarmusch Scott A, Frisvad Jens C, Larsen Thomas O

机构信息

DTU Bioengineering, Technical University of Denmark, DK-2800, Kgs. Lyngby, Denmark.

出版信息

Nat Prod Rep. 2023 Feb 22;40(2):237-274. doi: 10.1039/d1np00074h.

Abstract

Covering: up to the end of 2021Aspergilli are biosynthetically 'talented' micro-organisms and therefore the natural products community has continually been interested in the wealth of biosynthetic gene clusters (BGCs) encoding numerous secondary metabolites related to these fungi. With the rapid increase in sequenced fungal genomes combined with the continuous development of bioinformatics tools such as antiSMASH, linking new structures to unknown BGCs has become much easier when taking retro-biosynthetic considerations into account. On the other hand, in most cases it is not as straightforward to prove proposed biosynthetic pathways due to the lack of implemented genetic tools in a given fungal species. As a result, very few secondary metabolite biosynthetic pathways have been characterized even amongst some of the most well studied spp., section (black aspergilli). This review will cover all known biosynthetic compound families and their structural diversity known from black aspergilli. We have logically divided this into sub-sections describing major biosynthetic classes (polyketides, non-ribosomal peptides, terpenoids, meroterpenoids and hybrid biosynthesis). Importantly, we will focus the review on metabolites which have been firmly linked to their corresponding BGCs.

摘要

涵盖范围

截至2021年底

曲霉是具有生物合成“天赋”的微生物,因此天然产物领域一直对这些真菌中编码众多次级代谢产物的丰富生物合成基因簇(BGC)感兴趣。随着测序真菌基因组数量的迅速增加,再加上antiSMASH等生物信息学工具的不断发展,在考虑逆向生物合成的情况下,将新结构与未知BGC联系起来变得更加容易。另一方面,在大多数情况下,由于给定真菌物种中缺乏实用的遗传工具,证明所提出的生物合成途径并非易事。因此,即使在一些研究最为深入的曲霉属(黑曲霉)物种中,也只有极少数次级代谢产物生物合成途径得到了表征。本综述将涵盖从黑曲霉中已知的所有生物合成化合物家族及其结构多样性。我们从逻辑上将其分为几个小节,描述主要的生物合成类别(聚酮化合物、非核糖体肽、萜类化合物、杂萜类化合物和混合生物合成)。重要的是,我们将把综述重点放在那些已与相应BGC紧密关联的代谢产物上。

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