Lan Qiong, Zhao Congying, Chen Chong, Xu Hui, Fang Yating, Yao Hongbing, Zhu Bofeng
Guangzhou Key Laboratory of Forensic Multi-Omics for Precision Identification, School of Forensic Medicine, Southern Medical University, Guangzhou, China.
Microbiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical University, Guangzhou, China.
Front Genet. 2022 Apr 27;13:816737. doi: 10.3389/fgene.2022.816737. eCollection 2022.
The MPS technology has expanded the potential applications of DNA markers and increased the discrimination power of the targeted loci by taking variations in their flanking regions into consideration. Here, a collection of nuclear and extranuclear DNA markers (totally six kinds of nuclear genetic markers and mtDNA hypervariable region variations) were comprehensively and systematically assessed for polymorphism detections, further employed to dissect the population backgrounds in the Yugu ethnic group from Gansu province (Yugu) and Han population from the Inner Mongolia Autonomous Region (NMH) of China. The elevated efficiencies of the marker set in separating full sibling and challenging half sibling determination cases in parentage tests (iiSNPs), as well as predicting ancestry origins of unknown individuals from at least four continental populations (aiSNPs) and providing informative characteristic-related clues for Chinese populations (piSNPs) are highlighted in the present study. To sum up, different sets of DNA markers revealed sufficient effciencies to serve as promising tools in forensic applications. Genetic insights from the perspectives of autosomal DNA, Y chromosomal DNA, and mtDNA variations yielded that the Yugu ethnic group was genetically close related to the Han populations of the northern region. But we admit that more reference populations (like Mongolian, Tibetan, Hui, and Tu) should be incorporated to gain a refined genetic background landscape of the Yugu group in future studies.
MPS技术通过考虑侧翼区域的变异,扩展了DNA标记的潜在应用,并提高了目标位点的鉴别能力。在此,对一系列核DNA和核外DNA标记(总共六种核遗传标记和线粒体DNA高变区变异)进行了全面系统的多态性检测评估,并进一步用于剖析中国甘肃省裕固族(裕固)和内蒙古自治区汉族(内蒙汉族)的群体背景。本研究强调了该标记集在亲子鉴定中区分全同胞和挑战半同胞判定案例(iiSNP),以及预测至少四个大陆群体中未知个体的祖先起源(aiSNP)和为中国人群提供信息丰富的特征相关线索(piSNP)方面的更高效率。总之,不同的DNA标记集显示出足够的效率,可作为法医应用中的有前景工具。从常染色体DNA、Y染色体DNA和线粒体DNA变异角度获得的遗传学见解表明,裕固族与中国北方汉族在基因上密切相关。但我们承认,未来研究中应纳入更多参考群体(如蒙古族、藏族、回族和土族),以获得裕固族更精细的遗传背景概况。