Institute of Plant Quarantine, Chinese Academy of Inspection and Quarantine, Beijing 100176, China.
Institute of Physical Science and Information Technology, Anhui University, Hefei 230601, China; Computational Virology Group, Center for Bacteria and Virus Resources and Bioinformation, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China; CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Genomics Proteomics Bioinformatics. 2022 Apr;20(2):394-404. doi: 10.1016/j.gpb.2022.04.005. Epub 2022 May 24.
Quarantine insects are economically important pests that frequently invade new habitats. A rapid and accurate monitoring method to trace the geographical sources of invaders is required for their prevention, detection, and eradication. Current methods based on genetics are typically time-consuming. Here, we developed a novel tracing method based on insect gut microbiota. The source location of the insect gut microbiota can be used to rapidly determine the geographical origin of the insect. We analyzed 179 gut microbiota samples from 591 individuals of 22 quarantine insect species collected from 36 regions in China. The gut microbiota of these insects primarily included Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, Proteobacteria, and Tenericutes. The diversity of the insect gut microbiota was closely associated with geographical and environmental factors. Different insect species could be distinguished based on the composition of gut microbiota at the phylum level. Populations of individual insect species from different regions could be distinguished based on the composition of gut microbiota at the phylum, class, and order levels. A method for determining the geographical origins of invasive insect species has been established; however, its practical application requires further investigations before implementation.
检疫昆虫是经济上重要的害虫,经常入侵新的栖息地。为了预防、检测和根除这些害虫,需要一种快速、准确的监测方法来追踪入侵物种的地理来源。目前基于遗传学的方法通常很耗时。在这里,我们开发了一种基于昆虫肠道微生物群的新型追踪方法。通过分析 179 个肠道微生物群样本和 591 个来自中国 36 个地区的 22 种检疫昆虫个体,发现昆虫肠道微生物群的来源位置可用于快速确定昆虫的地理起源。这些昆虫的肠道微生物群主要包括放线菌、拟杆菌门、蓝细菌、厚壁菌门、变形菌门和无壁菌门。昆虫肠道微生物群的多样性与地理和环境因素密切相关。基于门水平的肠道微生物群组成,可以区分不同的昆虫物种。基于门、纲和目的肠道微生物群组成,可以区分来自不同地区的个体昆虫种群。已经建立了一种确定入侵昆虫物种地理起源的方法,但在实施之前,需要进一步研究才能实际应用。