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在肺转移的小鼠模型中进行定植基因的功能获得型 cDNA 文库筛选。

gain-of-function cDNA library screening for colonization genes in a mouse model of pulmonary metastasis.

机构信息

Department of Pathology and Cancer Center, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.

Harvard Stem Cell Institute, Cambridge, MA 02138, USA.

出版信息

STAR Protoc. 2022 May 25;3(2):101413. doi: 10.1016/j.xpro.2022.101413. eCollection 2022 Jun 17.

DOI:10.1016/j.xpro.2022.101413
PMID:35634360
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9136352/
Abstract

We provide a protocol for gain-of-function (GOF) cDNA screen of genes that foster cancer cell colonization of secondary tissues, the last and most lethal step of the metastasis cascade. We present techniques for cDNA viral library preparation and delivery leading up to the recovery of colonization-promoting sequences in a proof-of-concept DU145-based mouse model of pulmonary metastasis. Adapted to other cDNA libraries and cancer models, this approach would prove widely useful in enumerating intrinsic genetic determinants underlying metastatic colonization. For complete details on the use and execution of this protocol, please refer to Tu et al. (2021).

摘要

我们提供了一个功能获得(GOF)cDNA 筛选基因的方案,这些基因促进癌细胞在次级组织中的定植,这是转移级联的最后也是最致命的步骤。我们介绍了 cDNA 病毒文库制备和递送的技术,这些技术可在以 DU145 为基础的肺转移小鼠模型中回收促进定植的序列,从而证明该方案的可行性。该方法适用于其他 cDNA 文库和癌症模型,如果加以适当调整,将广泛用于确定转移定植的内在遗传决定因素。有关该方案使用和实施的完整详细信息,请参阅 Tu 等人(2021 年)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/4bf9b8687af0/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/b3053ba06393/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/11290b036e7a/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/450426e54a95/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/4bf9b8687af0/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/b3053ba06393/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/11290b036e7a/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/450426e54a95/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a793/9136352/4bf9b8687af0/gr3.jpg

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本文引用的文献

1
library screening identifies the metabolic enzyme aldolase A as a promoter of metastatic lung colonization.文库筛选确定代谢酶醛缩酶A是转移性肺定植的促进因子。
iScience. 2021 Apr 20;24(5):102425. doi: 10.1016/j.isci.2021.102425. eCollection 2021 May 21.
2
Lentivirus-delivered stable gene silencing by RNAi in primary cells.通过RNA干扰在原代细胞中实现慢病毒介导的稳定基因沉默。
RNA. 2003 Apr;9(4):493-501. doi: 10.1261/rna.2192803.