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CRISPR/Cas12a 触发化学发光增强生物传感器,通过引入酪胺信号放大策略实现核酸的灵敏检测。

CRISPR/Cas12a-Triggered Chemiluminescence Enhancement Biosensor for Sensitive Detection of Nucleic Acids by Introducing a Tyramide Signal Amplification Strategy.

机构信息

The Children's Hospital, Zhejiang University School of Medicine, National Clinical Research Center for Child Health, Hangzhou, Zhejiang 310052, China.

International Peace Maternity & Child Health Hospital, Shanghai Municipal Key Clinical Specialty, Institute of Embryo-Fetal Original Adult Disease, School of Medicine, Shanghai Jiao Tong University, Shanghai 200030, China.

出版信息

Anal Chem. 2022 Jun 14;94(23):8506-8513. doi: 10.1021/acs.analchem.2c01507. Epub 2022 May 29.

DOI:10.1021/acs.analchem.2c01507
PMID:35635022
Abstract

CRISPR-based biosensors have attracted increasing attention in accurate and sensitive nucleic acid detection. In this work, we report a SPR/Cas12a-triggered hemiluminescence nhancement biosensor for the ultrasensitive etection of nucleic acids by introducing tyramide signal amplification for the first time (termed CRICED). The hybrid chain DNA (crDNA) formed by NH-capture DNA (capDNA) and biotin-recognition DNA (recDNA) was preferentially attached to the magnetic beads (MBs), and the streptavidin-HRP was subsequently introduced to obtain MB@HRP-crDNA. In the presence of the DNA target, the activated CRISPR/Cas12a is capable of randomly cutting initiator DNA (intDNA) into vast short products, and thus the fractured intDNA could not trigger the toehold-mediated DNA-strand displacement reaction (TSDR) event with MB@HRP-crDNA. After the addition of tyramine-AP and HO, abundant HRP-tyramine-AP emerges through the covalent attachment of HRP-tyramine, exhibiting enhanced chemiluminescence (CL) signals or visual image readouts. By virtue of this biosensor, we achieved high sensitivity of synthetic DNA target and amplified DNA plasmid using recombinase polymerase amplification (RPA) as low as 17 pM and single-copy detection, respectively. Our proposed CRICED was further evaluated to test 20 HPV clinical samples, showing a superior sensitivity of 87.50% and specificity of 100.00%. Consequently, the CRICED platform could be an attractive means for ultrasensitive and imaging detection of nucleic acids and holds a promising strategy for the practical application of CRISPR-based diagnostics.

摘要

基于 CRISPR 的生物传感器在准确和灵敏的核酸检测中引起了越来越多的关注。在这项工作中,我们首次报道了一种 SPR/Cas12a 触发的半发光 nhancement 生物传感器,用于通过引入辣根过氧化物酶信号放大来超灵敏检测核酸(称为 CRICED)。NH 捕获 DNA (capDNA) 和生物素识别 DNA (recDNA) 形成的杂交链 DNA (crDNA) 优先附着在磁珠 (MBs) 上,随后引入链霉亲和素-HRP 以获得 MB@HRP-crDNA。在存在 DNA 靶标时,激活的 CRISPR/Cas12a 能够将起始 DNA (intDNA) 随机切割成大量短产物,因此断裂的 intDNA 不能触发与 MB@HRP-crDNA 的引发 DNA 链置换反应 (TSDR) 事件。加入酪胺-AP 和 HO 后,大量 HRP-酪胺-AP 通过 HRP-酪胺的共价连接出现,表现出增强的化学发光 (CL) 信号或可视图像读出。借助该生物传感器,我们实现了使用重组酶聚合扩增 (RPA) 作为低至 17 pM 和单拷贝检测的合成 DNA 靶标和扩增 DNA 质粒的高灵敏度。我们进一步评估了所提出的 CRICED 以测试 20 个 HPV 临床样本,显示出 87.50%的优异灵敏度和 100.00%的特异性。因此,CRICED 平台可以成为一种用于核酸超灵敏和成像检测的有吸引力的方法,并为基于 CRISPR 的诊断的实际应用提供了有前途的策略。

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