Zhang Hanqun, Zhang Yun, Feng Zhiyu, Lu Liang, Li Yong, Liu Yuncong, Chen Yanping
Department of Oncology, Guizhou Provincial People's Hospital, Guiyang, China.
Department of Pathology, Guizhou Provincial People's Hospital, Guiyang, China.
Front Genet. 2022 May 12;13:801698. doi: 10.3389/fgene.2022.801698. eCollection 2022.
We aimed to explore the expression and carcinogenic effect of KRT17 in human tumors and provide useful information for the study of KRT17. We used databases including the Cancer Genome Atlas, Gene Expression Omnibus, GTEx, and GEPIA2 to analyze the expression, mutation, and prognosis of KRT17 in human tumors. Through webservers, including UALCAN, TIMER2.0, and STRING, we learned about the genetic variation, immune cell penetration, and enrichment analysis of KRT17-related genes. KRT17 was highly expressed in most tumors (such as esophageal cancer, lung cancer, cervical cancer, etc.), and the high expression level correlated with tumor stage and prognosis. In addition, amplification was the main type of KRT17 tumor variation, with an amplification rate of about 9%, followed by mutation, with a mutation rate of 4%. Moreover, KRT17 was strongly associated with tumor-infiltrating immune cells (such as macrophages, CD8+T, Tregs, and cancer-associated fibroblasts). KEGG analysis suggested that KRT17 may play a role in tumor pathogenesis following human papillomavirus infection, and the gene ontology enrichment analysis indicated that the carcinogenicity of KRT17 can be attributed to cadherin binding, intermediate fibrocytoskeleton and epidermal development. KRT17 may play an important role in the occurrence, development, and prognosis of malignant tumors. We provided a relatively comprehensive description of the carcinogenic role of KRT17 in different tumors for the first time.
我们旨在探讨KRT17在人类肿瘤中的表达及致癌作用,为KRT17的研究提供有用信息。我们使用了包括癌症基因组图谱、基因表达综合数据库、基因型组织表达数据库和基因表达谱交互分析2在内的数据库,来分析KRT17在人类肿瘤中的表达、突变及预后情况。通过UALCAN、TIMER2.0和STRING等网络服务器,我们了解了KRT17相关基因的基因变异、免疫细胞浸润及富集分析情况。KRT17在大多数肿瘤(如食管癌、肺癌、宫颈癌等)中高表达,且高表达水平与肿瘤分期及预后相关。此外,扩增是KRT17肿瘤变异的主要类型,扩增率约为9%,其次是突变,突变率为4%。而且,KRT17与肿瘤浸润免疫细胞(如巨噬细胞、CD8+T细胞、调节性T细胞和癌症相关成纤维细胞)密切相关。京都基因与基因组百科全书分析表明,KRT17可能在人乳头瘤病毒感染后的肿瘤发病机制中发挥作用,基因本体富集分析表明,KRT17的致癌性可归因于钙黏蛋白结合、中间纤维细胞骨架和表皮发育。KRT17可能在恶性肿瘤的发生、发展及预后中发挥重要作用。我们首次对KRT17在不同肿瘤中的致癌作用进行了较为全面的描述。