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两种具有不同货物特异性的Pex5蛋白对玉米黑粉菌中的过氧化物酶体功能至关重要。

Two Pex5 Proteins With Different Cargo Specificity Are Critical for Peroxisome Function in Ustilago maydis.

作者信息

Ast Julia, Bäcker Nils, Bittner Elena, Martorana Domenica, Ahmad Humda, Bölker Michael, Freitag Johannes

机构信息

Department of Biology, Philipps-University Marburg, Marburg, Germany.

Institute of Metabolism and Systems Research (IMSR), and Centre of Membrane Proteins and Receptors (COMPARE), University of Birmingham, Birmingham, United Kingdom.

出版信息

Front Cell Dev Biol. 2022 May 12;10:858084. doi: 10.3389/fcell.2022.858084. eCollection 2022.

DOI:10.3389/fcell.2022.858084
PMID:35646929
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9133605/
Abstract

Peroxisomes are dynamic multipurpose organelles with a major function in fatty acid oxidation and breakdown of hydrogen peroxide. Many proteins destined for the peroxisomal matrix contain a -terminal peroxisomal targeting signal type 1 (PTS1), which is recognized by tetratricopeptide repeat (TPR) proteins of the Pex5 family. Various species express at least two different Pex5 proteins, but how this contributes to protein import and organelle function is not fully understood. Here, we analyzed truncated and chimeric variants of two Pex5 proteins, Pex5a and Pex5b, from the fungus Both proteins are required for optimal growth on oleic acid-containing medium. The -terminal domain (NTD) of Pex5b is critical for import of all investigated peroxisomal matrix proteins including PTS2 proteins and at least one protein without a canonical PTS. In contrast, the NTD of Pex5a is not sufficient for translocation of peroxisomal matrix proteins. In the presence of Pex5b, however, specific cargo can be imported this domain of Pex5a. The TPR domains of Pex5a and Pex5b differ in their affinity to variations of the PTS1 motif and thus can mediate import of different subsets of matrix proteins. Together, our data reveal that employs versatile targeting modules to control peroxisome function. These findings will promote our understanding of peroxisomal protein import also in other biological systems.

摘要

过氧化物酶体是动态的多功能细胞器,在脂肪酸氧化和过氧化氢分解中起主要作用。许多定位于过氧化物酶体基质的蛋白质含有一个C端1型过氧化物酶体靶向信号(PTS1),该信号由Pex5家族的四肽重复(TPR)蛋白识别。不同物种至少表达两种不同的Pex5蛋白,但这如何促进蛋白质导入和细胞器功能尚不完全清楚。在这里,我们分析了来自真菌的两种Pex5蛋白Pex5a和Pex5b的截短和嵌合变体。两种蛋白都是在含油酸培养基上最佳生长所必需的。Pex5b的N端结构域(NTD)对于所有研究的过氧化物酶体基质蛋白的导入至关重要,包括PTS2蛋白和至少一种没有典型PTS的蛋白。相比之下,Pex5a的NTD不足以转运过氧化物酶体基质蛋白。然而,在存在Pex5b的情况下,特定货物可以通过Pex5a的这个结构域导入。Pex5a和Pex5b的TPR结构域对PTS1基序变体的亲和力不同,因此可以介导不同基质蛋白子集的导入。总之,我们的数据表明,该真菌采用通用的靶向模块来控制过氧化物酶体功能。这些发现也将促进我们对其他生物系统中过氧化物酶体蛋白导入的理解。

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Two Pex5 Proteins With Different Cargo Specificity Are Critical for Peroxisome Function in Ustilago maydis.两种具有不同货物特异性的Pex5蛋白对玉米黑粉菌中的过氧化物酶体功能至关重要。
Front Cell Dev Biol. 2022 May 12;10:858084. doi: 10.3389/fcell.2022.858084. eCollection 2022.
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A missense allele preferentially disrupts PTS1 cargo import into Arabidopsis peroxisomes.一个错义等位基因优先破坏拟南芥过氧化物酶体中PTS1货物的导入。
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The tetratricopeptide repeat domains of human, tobacco, and nematode PEX5 proteins are functionally interchangeable with the analogous native domain for peroxisomal import of PTS1-terminated proteins in yeast.人类、烟草和线虫PEX5蛋白的四肽重复结构域在功能上可与酵母中用于过氧化物酶体导入PTS1末端蛋白的类似天然结构域互换。
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Interdependence of the peroxisome-targeting receptors in Arabidopsis thaliana: PEX7 facilitates PEX5 accumulation and import of PTS1 cargo into peroxisomes.拟南芥过氧化物酶体靶向受体的相互依赖性:PEX7 促进 PEX5 的积累和 PTS1 货物向过氧化物酶体的输入。
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The Arabidopsis peroxisomal targeting signal type 2 receptor PEX7 is necessary for peroxisome function and dependent on PEX5.拟南芥过氧化物酶体靶向信号2型受体PEX7对于过氧化物酶体功能是必需的,并且依赖于PEX5。
Mol Biol Cell. 2005 Feb;16(2):573-83. doi: 10.1091/mbc.e04-05-0422. Epub 2004 Nov 17.
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pex5 Mutants that differentially disrupt PTS1 and PTS2 peroxisomal matrix protein import in Arabidopsis.pex5 突变体在拟南芥中差异地破坏 PTS1 和 PTS2 过氧化物酶体基质蛋白的输入。
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Redox-regulated cargo binding and release by the peroxisomal targeting signal receptor, Pex5.过氧化物酶体靶向信号受体 Pex5 通过氧化还原调控货物的结合与释放。
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A missense allele of PEX5 is responsible for the defective import of PTS2 cargo proteins into peroxisomes.一种 PEX5 的错义等位基因负责 PTS2 货物蛋白向过氧化物酶体的缺陷性输入。
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Peroxisomal targeting signal receptor Pex5p interacts with cargoes and import machinery components in a spatiotemporally differentiated manner: conserved Pex5p WXXXF/Y motifs are critical for matrix protein import.过氧化物酶体靶向信号受体Pex5p以时空分化的方式与货物及导入机制组件相互作用:保守的Pex5p WXXXF/Y基序对基质蛋白导入至关重要。
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Versatile allosteric properties in Pex5-like tetratricopeptide repeat proteins to induce diverse downstream function.Pex5 样四肽重复蛋白的多功能别构特性可诱导多种下游功能。
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引用本文的文献

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Peroxisomal compartmentalization of amino acid biosynthesis reactions imposes an upper limit on compartment size.过氧化物酶体将氨基酸生物合成反应分隔在不同的隔室内,这对隔室的大小施加了上限。
Nat Commun. 2023 Sep 8;14(1):5544. doi: 10.1038/s41467-023-41347-x.
3
Sharing the wealth: The versatility of proteins targeted to peroxisomes and other organelles.共享财富:靶向过氧化物酶体及其他细胞器的蛋白质的多功能性

本文引用的文献

1
Determining the targeting specificity of the selective peroxisomal targeting factor Pex9.确定选择性过氧化物酶体靶向因子 Pex9 的靶向特异性。
Biol Chem. 2022 Oct 24;404(2-3):121-133. doi: 10.1515/hsz-2022-0116. Print 2023 Feb 23.
2
Systematic multi-level analysis of an organelle proteome reveals new peroxisomal functions.系统多层次分析细胞器蛋白质组揭示新的过氧化物酶体功能。
Mol Syst Biol. 2022 Sep;18(9):e11186. doi: 10.15252/msb.202211186.
3
Versatile allosteric properties in Pex5-like tetratricopeptide repeat proteins to induce diverse downstream function.
Front Cell Dev Biol. 2022 Sep 26;10:934331. doi: 10.3389/fcell.2022.934331. eCollection 2022.
Pex5 样四肽重复蛋白的多功能别构特性可诱导多种下游功能。
Traffic. 2021 May;22(5):140-152. doi: 10.1111/tra.12785. Epub 2021 Feb 26.
4
Towards the molecular architecture of the peroxisomal receptor docking complex.迈向过氧化物酶体受体对接复合物的分子结构
Proc Natl Acad Sci U S A. 2020 Dec 29;117(52):33216-33224. doi: 10.1073/pnas.2009502117. Epub 2020 Dec 15.
5
A piggybacking mechanism enables peroxisomal localization of the glyoxylate cycle enzyme Mdh2 in yeast.载体蛋白机制使乙醛酸循环酶 Mdh2 在酵母中定位于过氧化物酶体。
J Cell Sci. 2020 Dec 17;133(24):jcs244376. doi: 10.1242/jcs.244376.
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Uncovering targeting priority to yeast peroxisomes using an in-cell competition assay.利用细胞内竞争测定法揭示酵母过氧化物酶体的靶向优先级。
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7
Non-AUG Translation Initiation Generates Peroxisomal Isoforms of 6-Phosphogluconate Dehydrogenase in Fungi.非AUG翻译起始在真菌中产生6-磷酸葡萄糖酸脱氢酶的过氧化物酶体同工型。
Front Cell Dev Biol. 2020 May 5;8:251. doi: 10.3389/fcell.2020.00251. eCollection 2020.
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Peroxisomal targeting of a protein phosphatase type 2C via mitochondrial transit.通过线粒体转运靶向蛋白质磷酸酶 2C 到过氧化物酶体。
Nat Commun. 2020 May 12;11(1):2355. doi: 10.1038/s41467-020-16146-3.
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The Peroxisomal Targeting Signal 3 (PTS3) of the Budding Yeast Acyl-CoA Oxidase Is a Signal Patch.出芽酵母酰基辅酶A氧化酶的过氧化物酶体靶向信号3(PTS3)是一个信号斑。
Front Cell Dev Biol. 2020 Mar 27;8:198. doi: 10.3389/fcell.2020.00198. eCollection 2020.
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The type-2 peroxisomal targeting signal.Ⅱ型过氧化物酶体靶向信号。
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