利用疾病动力学数学模型和机器学习来改进新型疟疾干预措施的研发。

Leveraging mathematical models of disease dynamics and machine learning to improve development of novel malaria interventions.

机构信息

Swiss Tropical and Public Health Institute, Allschwil, Switzerland.

University of Basel, Basel, Switzerland.

出版信息

Infect Dis Poverty. 2022 Jun 4;11(1):61. doi: 10.1186/s40249-022-00981-1.

Abstract

BACKGROUND

Substantial research is underway to develop next-generation interventions that address current malaria control challenges. As there is limited testing in their early development, it is difficult to predefine intervention properties such as efficacy that achieve target health goals, and therefore challenging to prioritize selection of novel candidate interventions. Here, we present a quantitative approach to guide intervention development using mathematical models of malaria dynamics coupled with machine learning. Our analysis identifies requirements of efficacy, coverage, and duration of effect for five novel malaria interventions to achieve targeted reductions in malaria prevalence.

METHODS

A mathematical model of malaria transmission dynamics is used to simulate deployment and predict potential impact of new malaria interventions by considering operational, health-system, population, and disease characteristics. Our method relies on consultation with product development stakeholders to define the putative space of novel intervention specifications. We couple the disease model with machine learning to search this multi-dimensional space and efficiently identify optimal intervention properties that achieve specified health goals.

RESULTS

We apply our approach to five malaria interventions under development. Aiming for malaria prevalence reduction, we identify and quantify key determinants of intervention impact along with their minimal properties required to achieve the desired health goals. While coverage is generally identified as the largest driver of impact, higher efficacy, longer protection duration or multiple deployments per year are needed to increase prevalence reduction. We show that interventions on multiple parasite or vector targets, as well as combinations the new interventions with drug treatment, lead to significant burden reductions and lower efficacy or duration requirements.

CONCLUSIONS

Our approach uses disease dynamic models and machine learning to support decision-making and resource investment, facilitating development of new malaria interventions. By evaluating the intervention capabilities in relation to the targeted health goal, our analysis allows prioritization of interventions and of their specifications from an early stage in development, and subsequent investments to be channeled cost-effectively towards impact maximization. This study highlights the role of mathematical models to support intervention development. Although we focus on five malaria interventions, the analysis is generalizable to other new malaria interventions.

摘要

背景

目前正在进行大量研究,以开发能够应对当前疟疾控制挑战的下一代干预措施。由于在早期开发阶段的测试有限,因此难以预先定义干预措施的效果等属性,以实现目标健康目标,因此难以优先选择新型候选干预措施。在这里,我们提出了一种使用疟疾动力学的数学模型和机器学习来指导干预措施开发的定量方法。我们的分析确定了实现疟疾发病率目标降低所需的五种新型疟疾干预措施的功效、覆盖率和作用持续时间的要求。

方法

使用疟疾传播动力学的数学模型来模拟新的疟疾干预措施的部署并预测其潜在影响,同时考虑操作、卫生系统、人口和疾病特征。我们的方法依赖于与产品开发利益相关者协商,以定义新干预措施规范的假设空间。我们将疾病模型与机器学习相结合,搜索这个多维空间,并有效地确定实现指定健康目标的最佳干预措施属性。

结果

我们将我们的方法应用于五种正在开发中的疟疾干预措施。为了降低疟疾发病率,我们确定并量化了干预措施影响的关键决定因素及其达到预期健康目标所需的最小属性。虽然覆盖率通常被认为是影响最大的驱动因素,但为了增加发病率降低,需要更高的功效、更长的保护持续时间或每年多次部署。我们表明,针对多个寄生虫或媒介目标的干预措施,以及将新干预措施与药物治疗相结合的组合,可显著降低疾病负担并降低功效或持续时间要求。

结论

我们的方法使用疾病动力学模型和机器学习来支持决策和资源投资,促进新的疟疾干预措施的开发。通过将干预措施的能力与目标健康目标相关联进行评估,我们的分析允许在早期阶段对干预措施及其规格进行优先级排序,并随后将投资有效地引导至影响最大化。本研究强调了数学模型在支持干预措施开发中的作用。虽然我们专注于五种疟疾干预措施,但分析是普遍适用于其他新的疟疾干预措施的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29d3/9167503/4582d0548c08/40249_2022_981_Fig1_HTML.jpg

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