基于质谱的视网膜蛋白质组学。
Mass spectrometry-based retina proteomics.
机构信息
Department of Pharmacology and Neuroscience, University of North Texas Health Science Center, Fort Worth, Texas, USA.
出版信息
Mass Spectrom Rev. 2023 May;42(3):1032-1062. doi: 10.1002/mas.21786. Epub 2022 Jun 6.
Abstract
A subfield of neuroproteomics, retina proteomics has experienced a transformative growth since its inception due to methodological advances in enabling chemical, biochemical, and molecular biology techniques. This review focuses on mass spectrometry's contributions to facilitate mammalian and avian retina proteomics to catalog and quantify retinal protein expressions, determine their posttranslational modifications, as well as its applications to study the proteome of the retina in the context of biology, health and diseases, and therapy developments.
摘要
神经蛋白质组学的一个分支，视网膜蛋白质组学自成立以来，由于能够实现化学、生化和分子生物学技术的方法学进步，经历了变革性的增长。这篇综述重点介绍了质谱技术在促进哺乳动物和禽类视网膜蛋白质组学方面的贡献，以对视网膜蛋白质表达进行编目和定量，确定它们的翻译后修饰，以及将其应用于研究生物学、健康和疾病以及治疗发展背景下的视网膜蛋白质组。
相似文献
1
Mass spectrometry-based retina proteomics.
Mass Spectrom Rev. 2023 May;42(3):1032-1062. doi: 10.1002/mas.21786. Epub 2022 Jun 6.
2
Obtaining Complete Human Proteomes.
Annu Rev Genomics Hum Genet. 2022 Aug 31;23:99-121. doi: 10.1146/annurev-genom-112921-024948. Epub 2022 Apr 19.
3
Application of targeted mass spectrometry in bottom-up proteomics for systems biology research.
J Proteomics. 2018 Oct 30;189:75-90. doi: 10.1016/j.jprot.2018.02.008. Epub 2018 Feb 13.
4
Regulation of developmental processes: insights from mass spectrometry-based proteomics.
Wiley Interdiscip Rev Dev Biol. 2013 Sep-Oct;2(5):723-34. doi: 10.1002/wdev.102. Epub 2012 Dec 6.
5
Posttranslational modifications in systems biology.
Adv Protein Chem Struct Biol. 2021;127:93-126. doi: 10.1016/bs.apcsb.2021.03.005. Epub 2021 Apr 17.
6
Mass Spectrometry-Based Chemical and Enzymatic Methods for Global Analysis of Protein Glycosylation.
Acc Chem Res. 2018 Aug 21;51(8):1796-1806. doi: 10.1021/acs.accounts.8b00200. Epub 2018 Jul 16.
7
Overview and considerations in bottom-up proteomics.
Analyst. 2023 Jan 31;148(3):475-486. doi: 10.1039/d2an01246d.
8
Emerging mass spectrometry-based proteomics methodologies for novel biomedical applications.
Biochem Soc Trans. 2020 Oct 30;48(5):1953-1966. doi: 10.1042/BST20191091.
9
Identification, Quantification, and Site Localization of Protein Posttranslational Modifications via Mass Spectrometry-Based Proteomics.
Adv Exp Med Biol. 2016;919:345-382. doi: 10.1007/978-3-319-41448-5_17.
10
Proteomics approaches in the quest of kidney disease biomarkers.
Prilozi. 2011;32(2):33-51.
引用本文的文献
1
Genetically Engineered Liposwitch-Based Nanomaterials.
Biomacromolecules. 2024 Dec 9;25(12):8058-8068. doi: 10.1021/acs.biomac.4c01388. Epub 2024 Nov 4.
2
The Prodrug DHED Delivers 17β-Estradiol into the Retina for Protection of Retinal Ganglion Cells and Preservation of Visual Function in an Animal Model of Glaucoma.
Cells. 2024 Jun 29;13(13):1126. doi: 10.3390/cells13131126.
3
G protein-coupled receptors and traditional Chinese medicine: new thinks for the development of traditional Chinese medicine.
Chin Med. 2024 Jul 2;19(1):92. doi: 10.1186/s13020-024-00964-4.
4
Proteomics-Based Identification of Retinal Protein Networks Impacted by Elevated Intraocular Pressure in the Hypertonic Saline Injection Model of Experimental Glaucoma.
Int J Mol Sci. 2023 Aug 9;24(16):12592. doi: 10.3390/ijms241612592.
本文引用的文献
1
Proteomic Analysis of Retinal Tissue in an S100B Autoimmune Glaucoma Model.
Biology (Basel). 2021 Dec 23;11(1):16. doi: 10.3390/biology11010016.
2
Reintroduction of DJ-1 in Müller Cells Inhibits Retinal Degeneration in the DJ-1 Deficient Retina.
Antioxidants (Basel). 2021 Nov 23;10(12):1862. doi: 10.3390/antiox10121862.
3
Novel Regulators of Retina Neovascularization: A Proteomics Approach.
J Proteome Res. 2022 Jan 7;21(1):101-117. doi: 10.1021/acs.jproteome.1c00547. Epub 2021 Dec 17.
4
Metabolic Imbalance Effect on Retinal Müller Glial Cells Reprogramming Capacity: Involvement of Histone Deacetylase SIRT6.
Front Genet. 2021 Nov 4;12:769723. doi: 10.3389/fgene.2021.769723. eCollection 2021.
5
Proteomics analysis of N-methyl-d-aspartate-induced cell death in retinal and optic nerves.
J Proteomics. 2022 Feb 10;252:104427. doi: 10.1016/j.jprot.2021.104427. Epub 2021 Nov 13.
6
Targeted liquid chromatography-tandem mass spectrometry analysis of proteins: Basic principles, applications, and perspectives.
Proteomics. 2021 Dec;21(23-24):e2100153. doi: 10.1002/pmic.202100153. Epub 2021 Oct 17.
7
Proteomics-Based Retinal Target Engagement Analysis and Retina-Targeted Delivery of 17β-Estradiol by the DHED Prodrug for Ocular Neurotherapy in Males.
Pharmaceutics. 2021 Sep 2;13(9):1392. doi: 10.3390/pharmaceutics13091392.
8
Quantitative proteomic analysis after neuroprotective MyD88 inhibition in the retinal degeneration 10 mouse.
J Cell Mol Med. 2021 Oct;25(20):9533-9542. doi: 10.1111/jcmm.16893. Epub 2021 Sep 25.
9
First identification of ITM2B interactome in the human retina.
Sci Rep. 2021 Aug 26;11(1):17210. doi: 10.1038/s41598-021-96571-6.
10
Differential Retinal Protein Expression in Primary and Secondary Retinal Ganglion Cell Degeneration Identified by Integrated SWATH and Target-Based Proteomics.
Int J Mol Sci. 2021 Aug 10;22(16):8592. doi: 10.3390/ijms22168592.
Zotero 插件