• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

细菌中 RNA 降解体的区室化控制了底物的可及性,并确保了 mRNA 到核苷酸的协同降解。

Compartmentalization of RNA Degradosomes in Bacteria Controls Accessibility to Substrates and Ensures Concerted Degradation of mRNA to Nucleotides.

机构信息

LMGM, Université de Toulouse, CNRS, UPS, CBI, Toulouse, France; email:

TBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France.

出版信息

Annu Rev Microbiol. 2022 Sep 8;76:533-552. doi: 10.1146/annurev-micro-041020-113308. Epub 2022 Jun 7.

DOI:10.1146/annurev-micro-041020-113308
PMID:35671533
Abstract

RNA degradosomes are multienzyme complexes composed of ribonucleases, RNA helicases, and metabolic enzymes. RNase E-based degradosomes are widespread in . The RNA degradosome is sequestered from transcription in the nucleoid and translation in the cytoplasm by localization to the inner cytoplasmic membrane, where it forms short-lived clusters that are proposed to be sites of mRNA degradation. In , RNA degradosomes localize to ribonucleoprotein condensates in the interior of the cell [bacterial ribonucleoprotein-bodies (BR-bodies)], which have been proposed to drive the concerted degradation of mRNA to nucleotides. The turnover of mRNA in growing cells is important for maintaining pools of nucleotides for transcription and DNA replication.Membrane attachment of the RNA degradosome is necessary to avoid wasteful degradation of intermediates in ribosome assembly. Sequestering RNA degradosomes to BR-bodies, which exclude structured RNA, could have a similar role in protecting intermediates in ribosome assembly from degradation.

摘要

RNA 降解体是由核糖核酸酶、RNA 解旋酶和代谢酶组成的多酶复合物。基于 RNase E 的降解体在 中广泛存在。RNA 降解体通过定位于细胞质内膜而与核仁中的转录和细胞质中的翻译隔离,在那里形成短暂的聚集体,这些聚集体被提议为 mRNA 降解的部位。在 中,RNA 降解体定位于细胞内部的核糖核蛋白凝聚体(细菌核糖核蛋白体(BR 体))中,这些凝聚体被提议促进 mRNA 的协同降解为核苷酸。生长细胞中 mRNA 的周转率对于维持转录和 DNA 复制所需的核苷酸池很重要。 RNA 降解体的膜附着对于避免核糖体组装过程中中间产物的浪费降解是必要的。将 RNA 降解体隔离到 BR 体中,该体排除结构 RNA,可能在保护核糖体组装过程中的中间产物免受降解方面发挥类似作用。

相似文献

1
Compartmentalization of RNA Degradosomes in Bacteria Controls Accessibility to Substrates and Ensures Concerted Degradation of mRNA to Nucleotides.细菌中 RNA 降解体的区室化控制了底物的可及性,并确保了 mRNA 到核苷酸的协同降解。
Annu Rev Microbiol. 2022 Sep 8;76:533-552. doi: 10.1146/annurev-micro-041020-113308. Epub 2022 Jun 7.
2
Polyribosome-Dependent Clustering of Membrane-Anchored RNA Degradosomes To Form Sites of mRNA Degradation in Escherichia coli.多聚核糖体依赖性膜锚定 RNA 降解体簇集在大肠杆菌中形成 mRNA 降解位点。
mBio. 2021 Oct 26;12(5):e0193221. doi: 10.1128/mBio.01932-21. Epub 2021 Sep 7.
3
Attachment of the RNA degradosome to the bacterial inner cytoplasmic membrane prevents wasteful degradation of rRNA in ribosome assembly intermediates.RNA 降解体与细菌细胞质内膜的附着防止了核糖体组装中间体中 rRNA 的浪费降解。
PLoS Biol. 2023 Jan 5;21(1):e3001942. doi: 10.1371/journal.pbio.3001942. eCollection 2023 Jan.
4
α-Proteobacterial RNA Degradosomes Assemble Liquid-Liquid Phase-Separated RNP Bodies.α-变形菌 RNA 降解体组装液-液相分离的 RNP 体。
Mol Cell. 2018 Sep 20;71(6):1027-1039.e14. doi: 10.1016/j.molcel.2018.08.003. Epub 2018 Sep 6.
5
BR-Bodies Provide Selectively Permeable Condensates that Stimulate mRNA Decay and Prevent Release of Decay Intermediates.BR 体提供具有选择性渗透性的凝聚物,刺激 mRNA 衰变并防止衰变中间产物释放。
Mol Cell. 2020 May 21;78(4):670-682.e8. doi: 10.1016/j.molcel.2020.04.001. Epub 2020 Apr 27.
6
Detachment of the RNA degradosome from the inner membrane of Escherichia coli results in a global slowdown of mRNA degradation, proteolysis of RNase E and increased turnover of ribosome-free transcripts.RNA 降解体从大肠杆菌内膜上的脱离导致 mRNA 降解的全面减缓,RNase E 的蛋白水解和核糖体游离转录物周转率的增加。
Mol Microbiol. 2019 Jun;111(6):1715-1731. doi: 10.1111/mmi.14248. Epub 2019 Apr 6.
7
Bacterial RNA Degradosomes: Molecular Machines under Tight Control.细菌 RNA 降解体:严格调控下的分子机器
Trends Biochem Sci. 2020 Jan;45(1):42-57. doi: 10.1016/j.tibs.2019.10.002. Epub 2019 Nov 1.
8
The RNase J-Based RNA Degradosome Is Compartmentalized in the Gastric Pathogen Helicobacter pylori.基于 RNase J 的 RNA 降解体在胃病原体幽门螺杆菌中是分隔的。
mBio. 2020 Sep 15;11(5):e01173-20. doi: 10.1128/mBio.01173-20.
9
RNA degradosomes in bacteria and chloroplasts: classification, distribution and evolution of RNase E homologs.细菌和叶绿体中的RNA降解体:核糖核酸酶E同源物的分类、分布及进化
Mol Microbiol. 2015 Sep;97(6):1021-135. doi: 10.1111/mmi.13095. Epub 2015 Jul 22.
10
Analysis of mRNA decay and rRNA processing in Escherichia coli in the absence of RNase E-based degradosome assembly.在缺乏基于核糖核酸酶E的降解体组装的情况下,对大肠杆菌中mRNA衰变和rRNA加工的分析。
Mol Microbiol. 2000 Nov;38(4):854-66. doi: 10.1046/j.1365-2958.2000.02186.x.

引用本文的文献

1
The membrane-targeting-sequence motif is required for exhibition of recessive resurrection in Escherichia coli RNase E.膜靶向序列基序是大肠杆菌核糖核酸酶E中隐性复活表现所必需的。
Nucleic Acids Res. 2025 Jan 24;53(3). doi: 10.1093/nar/gkaf055.
2
Evolutionary engineering of methylotrophic E. coli enables fast growth on methanol.工程菌进化改造利用甲醇,使大肠杆菌能够快速生长。
Nat Commun. 2024 Oct 13;15(1):8840. doi: 10.1038/s41467-024-53206-4.
3
A synthetic methylotrophic as a chassis for bioproduction from methanol.一种合成甲基营养型生物作为从甲醇进行生物生产的底盘。
Nat Catal. 2024;7(5):560-573. doi: 10.1038/s41929-024-01137-0. Epub 2024 Apr 23.
4
Re-defining how mRNA degradation is coordinated with transcription and translation in bacteria.重新定义细菌中mRNA降解如何与转录和翻译协调进行。
bioRxiv. 2024 Apr 18:2024.04.18.588412. doi: 10.1101/2024.04.18.588412.
5
Co-transcriptional gene regulation in eukaryotes and prokaryotes.真核生物和原核生物中的共转录基因调控。
Nat Rev Mol Cell Biol. 2024 Jul;25(7):534-554. doi: 10.1038/s41580-024-00706-2. Epub 2024 Mar 20.
6
MinD-RNase E interplay controls localization of polar mRNAs in E. coli.MinD-RNase E 相互作用控制大肠杆菌中极性 mRNA 的定位。
EMBO J. 2024 Feb;43(4):637-662. doi: 10.1038/s44318-023-00026-9. Epub 2024 Jan 19.
7
The Small RNA-Binding Protein CcaF1 Promotes Formation of Photosynthetic Complexes in .Small RNA 结合蛋白 CcaF1 促进. 中光合复合物的形成。
Int J Mol Sci. 2023 May 30;24(11):9515. doi: 10.3390/ijms24119515.
8
Understanding spatiotemporal coupling of gene expression using single molecule RNA imaging technologies.利用单分子 RNA 成像技术理解基因表达的时空偶联。
Transcription. 2023 Jun-Oct;14(3-5):105-126. doi: 10.1080/21541264.2023.2199669. Epub 2023 Apr 12.
9
Ribonuclease E strongly impacts bacterial adaptation to different growth conditions.核糖核酸酶 E 强烈影响细菌对不同生长条件的适应。
RNA Biol. 2023 Jan;20(1):120-135. doi: 10.1080/15476286.2023.2195733.
10
Attachment of the RNA degradosome to the bacterial inner cytoplasmic membrane prevents wasteful degradation of rRNA in ribosome assembly intermediates.RNA 降解体与细菌细胞质内膜的附着防止了核糖体组装中间体中 rRNA 的浪费降解。
PLoS Biol. 2023 Jan 5;21(1):e3001942. doi: 10.1371/journal.pbio.3001942. eCollection 2023 Jan.