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菠萝基因组范围内 BBX 基因家族的鉴定和特征分析表明候选基因参与了花诱导和开花过程。

Genome-wide identification and characterization of the BBX gene family in pineapple reveals that candidate genes are involved in floral induction and flowering.

机构信息

Horticulture College, Hainan University, Hainan Provincial Key Laboratory of Quality Control of Tropical Horticultural Crops, Haikou 570228, China.

Key Laboratory of Biology and Genetic Resources of Tropical Crops, Ministry of Agriculture, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Hainan Institute for Tropical Agricultural Resources, Haikou 571101, China.

出版信息

Genomics. 2022 Jul;114(4):110397. doi: 10.1016/j.ygeno.2022.110397. Epub 2022 Jun 5.

Abstract

B-box zinc finger proteins contain one or two B-box domains, and sometimes, a CCT domain, which are involved in many biological processes, such as photomorphogenesis, flowering, anthocyanin synthesis and abiotic stress resistance. But the BBX gene family in pineapple has not been systematically studied. Nineteen BBX genes were detected in pineapple genome and divided into five groups according to phylogenetic analysis. The results of transcriptome analysis and RT-qPCR showed that most of AcBBX members were highly expressed during the flowering process, indicating that AcBBX gene may be involved in flower bud differentiation and morphogenesis. Transcriptional activation analysis showed that AcBBX6 and AcBBX18 had transcriptional activity and were located in the nucleus. Overexpression of AcBBX18 promoted flowering in Arabidopsis thaliana. These results provided a basis for further study functions and regulatory mechanism of BBX members in pineapple floral induction and flower development.

摘要

B-box 锌指蛋白包含一个或两个 B-box 结构域,有时还包含 CCT 结构域,这些结构域参与许多生物学过程,如光形态建成、开花、花色素合成和非生物胁迫抗性。但是菠萝中的 BBX 基因家族尚未得到系统研究。在菠萝基因组中检测到 19 个 BBX 基因,并根据系统发育分析将其分为五个亚组。转录组分析和 RT-qPCR 的结果表明,大多数 AcBBX 成员在开花过程中高表达,表明 AcBBX 基因可能参与花芽分化和形态发生。转录激活分析表明 AcBBX6 和 AcBBX18 具有转录活性,并且位于细胞核中。过表达 AcBBX18 促进拟南芥开花。这些结果为进一步研究菠萝花诱导和花发育过程中 BBX 成员的功能和调控机制提供了依据。

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