Yu Jian, Xie Xiaoyan, Zhang Yun, Jiang Feng, Wu Chuyan
Department of Rehabilitation Medicine, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Department of Neonatology, Obstetrics and Gynecology Hospital of Fudan University, Shanghai, China.
Front Med (Lausanne). 2022 May 23;9:906001. doi: 10.3389/fmed.2022.906001. eCollection 2022.
Obesity is a significant global health concern since it is connected to a higher risk of several chronic diseases. As a consequence, obesity may be described as a condition that reduces human life expectancy and significantly impacts life quality. Because traditional obesity diagnosis procedures have several flaws, it is vital to design new diagnostic models to enhance current methods. More obesity-related markers have been discovered in recent years as a result of improvements and enhancements in gene sequencing technology. Using current gene expression profiles from the Gene Expression Omnibus (GEO) collection, we identified differentially expressed genes (DEGs) associated with obesity and found 12 important genes (CRLS1, ANG, ALPK3, ADSSL1, ABCC1, HLF, AZGP1, TSC22D3, F2R, FXN, PEMT, and SPTAN1) using a random forest classifier. ALPK3, HLF, FXN, and SPTAN1 are the only genes that have never been linked to obesity. We also used an artificial neural network to build a novel obesity diagnosis model and tested its diagnostic effectiveness using public datasets.
肥胖是一个重大的全球健康问题,因为它与多种慢性疾病的较高风险相关。因此,肥胖可被描述为一种会降低人类预期寿命并严重影响生活质量的状况。由于传统的肥胖诊断程序存在若干缺陷,设计新的诊断模型以改进现有方法至关重要。近年来,随着基因测序技术的改进和提升,发现了更多与肥胖相关的标志物。利用来自基因表达综合数据库(GEO)的数据集中当前的基因表达谱,我们鉴定出与肥胖相关的差异表达基因(DEG),并使用随机森林分类器发现了12个重要基因(CRLS1、ANG、ALPK3、ADSSL1、ABCC1、HLF、AZGP1、TSC22D3、F2R、FXN、PEMT和SPTAN1)。ALPK3、HLF、FXN和SPTAN1是仅有的从未与肥胖相关联的基因。我们还使用人工神经网络构建了一种新型肥胖诊断模型,并使用公共数据集测试了其诊断有效性。