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椎间盘退变中线粒体相关关键基因的鉴定及其与免疫细胞浸润的关联

Identification of mitochondria-related key gene and association with immune cells infiltration in intervertebral disc degeneration.

作者信息

Guo Wei, Mu Kun, Li Wen-Shuai, Gao Shun-Xing, Wang Lin-Feng, Li Xiao-Ming, Zhao Jian-Yong

机构信息

Department of Orthopaedics, The Third Hospital of Hebei Medical University, Shijiazhuang, China.

Department of Orthopaedics, Hebei Province Cangzhou Hospital of Integrated Traditional Chinese Medicine-Western Medicine, Cangzhou, China.

出版信息

Front Genet. 2023 Mar 8;14:1135767. doi: 10.3389/fgene.2023.1135767. eCollection 2023.

Abstract

Intervertebral disc (IVD) degeneration and its inflammatory microenvironment can result in discogenic pain, which has been shown to stem from the nucleus pulposus (NP). Increasing evidence suggests that mitochondrial related genes are strictly connected to cell functionality and, importantly, it can regulate cell immune activity in response to damaged associated signals. Therefore, identification of mitochondria related genes might offer new diagnostic markers and therapeutic targets for IVD degeneration. In this study, we identified key genes involved in NP tissue immune cell infiltration during IVD degeneration by bioinformatic analysis. The key modules were screened by weighted gene co-expression network analysis (WCGNA). Characteristic genes were identified by random forest analysis. Then gene set enrichment analysis (GSEA) was used to explore the signaling pathways associated with the signature genes. Subsequently, CIBERSORT was used to classify the infiltration of immune cells. Function of the hub gene was confirmed by PCR, Western blotting and ELISA. Finally, we identified MFN2 as a crucial molecule in the process of NP cell pyroptosis and NLRP3 inflammasome activation. We speculate that the increased MFN2 expression in NP tissue along with the infiltration of CD8 T cells, NK cell and neutrophils play important roles in the pathogenesis of IVD degeneration.

摘要

椎间盘(IVD)退变及其炎性微环境可导致椎间盘源性疼痛,研究表明其源于髓核(NP)。越来越多的证据表明,线粒体相关基因与细胞功能密切相关,重要的是,它可响应损伤相关信号调节细胞免疫活性。因此,鉴定线粒体相关基因可能为IVD退变提供新的诊断标志物和治疗靶点。在本研究中,我们通过生物信息学分析鉴定了IVD退变过程中参与NP组织免疫细胞浸润的关键基因。通过加权基因共表达网络分析(WCGNA)筛选关键模块。通过随机森林分析鉴定特征基因。然后使用基因集富集分析(GSEA)探索与特征基因相关的信号通路。随后,使用CIBERSORT对免疫细胞浸润进行分类。通过PCR、蛋白质印迹和酶联免疫吸附测定(ELISA)证实枢纽基因的功能。最后,我们确定MFN2是NP细胞焦亡和NLRP3炎性小体激活过程中的关键分子。我们推测NP组织中MFN2表达增加以及CD8 T细胞、自然杀伤(NK)细胞和中性粒细胞浸润在IVD退变的发病机制中起重要作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1706/10030706/ef14fb20b813/fgene-14-1135767-g001.jpg

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