IEEE Trans Nanobioscience. 2023 Apr;22(2):245-258. doi: 10.1109/TNB.2022.3181615. Epub 2023 Mar 31.
As a research hotspot in the field of information processing, DNA computing exhibits several important underlying characteristics-from parallel computing and low energy consumption to high-performance storage capabilities-thereby enabling its wide application in nanomachines, molecular encryption, biological detection, medical diagnosis, etc. Based on DNA computing, the most rapidly developed field focuses on DNA molecular logic-gates computing. In particular, the recent advances in enzyme-based DNA logic gates has emerged as ideal materials for constructing DNA logic gates. In this review, we explore protein enzymes that can manipulate DNA, especially, nicking enzymes and polymerases with high efficiency and specificity, which are widely used in constructing DNA logic gates, as well as ribozyme that can construct DNA logic gates following various mechanism with distinct biomaterials. Accordingly, the review highlights the characteristics and applications of various types of DNAzyme-based logic gates models, considering their future developments in information, biomedicine, chemistry, and computers.
作为信息处理领域的研究热点,DNA 计算具有从并行计算和低能耗到高性能存储能力等重要基础特性,因此广泛应用于纳米机械、分子加密、生物检测、医学诊断等领域。基于 DNA 计算,发展最快的领域主要集中在 DNA 分子逻辑门计算上。特别是基于酶的 DNA 逻辑门的最新进展,已经成为构建 DNA 逻辑门的理想材料。在本文综述中,我们探讨了能够操纵 DNA 的蛋白质酶,特别是具有高效和特异性的切口酶和聚合酶,它们广泛应用于构建 DNA 逻辑门,以及可以使用不同生物材料构建遵循不同机制的 DNA 逻辑门的核酶。因此,该综述强调了各种基于 DNA 酶的逻辑门模型的特点和应用,考虑了它们在信息、生物医学、化学和计算机领域的未来发展。