University of Lübeck, Center of Structural and Cell Biology in Medicine (CSCM), Institute of Chemistry and Metabolomics, Ratzeburger Allee 160, 23562, Lübeck, Germany.
Virology Division, Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Yalelaan 1, 3584 CL, Utrecht, The Netherlands.
Commun Biol. 2022 Jun 9;5(1):563. doi: 10.1038/s42003-022-03497-4.
Norovirus capsids are icosahedral particles composed of 90 dimers of the major capsid protein VP1. The C-terminus of the VP1 proteins forms a protruding (P)-domain, mediating receptor attachment, and providing a target for neutralizing antibodies. NMR and native mass spectrometry directly detect P-domain monomers in solution for murine (MNV) but not for human norovirus (HuNoV). We report that the binding of glycochenodeoxycholic acid (GCDCA) stabilizes MNV-1 P-domain dimers (P-dimers) and induces long-range NMR chemical shift perturbations (CSPs) within loops involved in antibody and receptor binding, likely reflecting corresponding conformational changes. Global line shape analysis of monomer and dimer cross-peaks in concentration-dependent methyl TROSY NMR spectra yields a dissociation rate constant k of about 1 s for MNV-1 P-dimers. For structurally closely related HuNoV GII.4 Saga P-dimers a value of about 10s is obtained from ion-exchange chromatography, suggesting essential differences in the role of GCDCA as a cofactor for MNV and HuNoV infection.
诺如病毒衣壳是由 90 个主要衣壳蛋白 VP1 的二聚体组成的二十面体颗粒。VP1 蛋白的 C 末端形成一个突出的(P)结构域,介导受体附着,并为中和抗体提供靶标。NMR 和天然质谱直接检测到溶液中鼠源诺如病毒(MNV)而非人源诺如病毒(HuNoV)的 P 结构域单体。我们报告称,甘氨胆酸(GCDCA)的结合稳定了 MNV-1 P 结构域二聚体(P-dimers),并诱导了抗体和受体结合涉及的环内的长程 NMR 化学位移扰动(CSPs),可能反映了相应的构象变化。单体和二聚体交叉峰在浓度依赖性甲基 TROSY NMR 光谱中的全局线宽分析得出,MNV-1 P-dimers 的解离速率常数 k 约为 1s。对于结构上密切相关的 HuNoV GII.4 Saga P-dimers,从离子交换色谱中得到约 10s 的值,表明 GCDCA 作为 MNV 和 HuNoV 感染辅助因子的作用存在本质差异。