Jiang Quan, Xu Qiang, Pan Junfeng, Yao Xiaohong, Cheng Zhongping
Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, The Chinese Academy of Sciences, Wuhan 430074, China.
College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China.
Plants (Basel). 2022 May 30;11(11):1458. doi: 10.3390/plants11111458.
Wild peach is an important resource for improving existing peach varieties. However, the extant populations of wild peach show fragmented distribution due to human disturbance and geographic isolation. In this study, we used natural populations (or wild populations) of (Rosaceae) to assess the genetic effects of habitat fragmentation. A total of 368 individuals sampled from 16 natural populations were analyzed using 23 polymorphic simple sequence repeat (SSR) markers. maintained low within-population genetic variation and high level of genetic differentiation. Two genetic clusters were revealed based on three different methods (UPGMA, PCoA, and STRUCTURE). All populations showed a significant heterozygosity deficiency and most extant populations experienced recent reduction in population size. A significant isolation by distance (IBD) was observed with Mantel's test. Compared to historical gene flow, contemporary gene flow was restricted among the studied populations, suggesting a decrease in gene flow due to habitat fragmentation. Habitat fragmentation has impacted population genetic variation and genetic structure of . For breeding and conservation purpose, collecting as many individuals as possible from multiple populations to maximize genetic diversity was recommended during the process of germplasm collection. In addition, populations from central China had higher genetic diversity, suggesting these populations should be given priority for conservation and germplasm collection.
野生桃是改良现有桃品种的重要资源。然而,由于人类干扰和地理隔离,野生桃的现存种群呈现出碎片化分布。在本研究中,我们利用蔷薇科的自然种群(或野生种群)来评估栖息地碎片化的遗传效应。使用23个多态性简单序列重复(SSR)标记对从16个自然种群中采样的总共368个个体进行了分析。该物种保持了较低的种群内遗传变异和较高水平的遗传分化。基于三种不同方法(UPGMA、主坐标分析和STRUCTURE)揭示了两个遗传簇。所有种群均表现出显著的杂合性不足,且大多数现存种群近期经历了种群数量的减少。通过Mantel检验观察到显著的距离隔离(IBD)。与历史基因流相比,当代基因流在研究种群之间受到限制,这表明由于栖息地碎片化导致基因流减少。栖息地碎片化已经影响了该物种的种群遗传变异和遗传结构。出于育种和保护目的,建议在种质收集过程中从多个种群中收集尽可能多的个体,以最大化遗传多样性。此外,中国中部的种群具有较高的遗传多样性,这表明这些种群应优先进行保护和种质收集。