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生物信息学分析鉴定 PSMB 1/2/3/4/6/8/9/10 为透明细胞肾细胞癌的预后指标。

Bioinformatic Analysis Identifying PSMB 1/2/3/4/6/8/9/10 as Prognostic Indicators in Clear Cell Renal Cell Carcinoma.

机构信息

Department of Urology, The First Affiliated Hospital of China Medical University, Shenyang 110001, China.

Department of Ophthalmology, The First Affiliated Hospital of China Medical University, Shenyang 110001, China.

出版信息

Int J Med Sci. 2022 May 1;19(5):796-812. doi: 10.7150/ijms.71152. eCollection 2022.

Abstract

Renal cancer incidence has been increasing across the world, clear cell renal cell carcinoma (ccRCC) represents the major subtype of renal cancer. The proteasome is involved in onset, metabolism and survival of tumor and has been recognized as a therapeutic target for various malignancies, while the role of β subunits of proteasome, PSMB gene family, in ccRCC has not been fully unveiled. Herein we investigated the expression and the prognostic role of PSMBs in ccRCC by analyzing a series of databases, including ONCOMINE, UALCAN, cBioPortal, STRING, GEPIA, GO and KEGG. Over-expressions of PSMB1/2/4/7/8/9/10 mRNA were found in ccRCC tissues compared to normal tissues, transcriptional levels of PSMB2/3/4/6/8/9/10 were significantly positively associated with patients' individual cancer stages and grades. Similar or higher levels of proteins encoded by PSMB1/2/3/7/8/9/10 were observed in tumor tissues compared to normal renal tissues. Further, high mRNA levels of PSMB1/2/3/4/6/10 were correlated with shorter overall survival in univariate analysis. Taken together, the results of our analysis implied that overexpression of PSMB1/2/3/4/6/8/9/10 were indicative of worse prognosis of ccRCC. However, further researches were required to validate our findings.

摘要

肾癌的发病率在全球范围内呈上升趋势,透明细胞肾细胞癌(ccRCC)是肾癌的主要亚型。蛋白酶体参与肿瘤的发生、代谢和存活,已被认为是多种恶性肿瘤的治疗靶点,而蛋白酶体β亚基、PSMB 基因家族在 ccRCC 中的作用尚未完全揭示。在此,我们通过分析 ONCOMINE、UALCAN、cBioPortal、STRING、GEPIA、GO 和 KEGG 等一系列数据库,研究了 PSMBs 在 ccRCC 中的表达及其预后作用。与正常组织相比,ccRCC 组织中发现 PSMB1/2/4/7/8/9/10 mRNA 表达上调,PSMB2/3/4/6/8/9/10 的转录水平与患者个体癌症分期和分级呈显著正相关。与正常肾组织相比,肿瘤组织中编码 PSMB1/2/3/7/8/9/10 的蛋白水平相似或更高。此外,PSMB1/2/3/4/6/10 的高 mRNA 水平与单因素分析中的总生存期较短相关。综上所述,我们的分析结果表明,PSMB1/2/3/4/6/8/9/10 的过表达预示着 ccRCC 的预后更差。然而,需要进一步的研究来验证我们的发现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2fc2/9149646/5ce02572af37/ijmsv19p0796g001.jpg

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