Department of Chemistry, University of Zurich, 8057 Zurich, Switzerland.
Department of Pharmaceutical Sciences, University of Basel, 4056 Basel, Switzerland.
ACS Chem Biol. 2022 Jul 15;17(7):1799-1810. doi: 10.1021/acschembio.2c00153. Epub 2022 Jun 14.
Modified nucleoside triphosphates (NTPs) are powerful probes and medicines, but their anionic character impedes membrane permeability. As such, invasive delivery techniques, transport carriers, or prodrug strategies are required for their use. Here, we present a fluorescent 2'-deoxyribonucleoside triphosphate "TAMRA-dATP" that exhibits surprisingly high bioavailability . TAMRA-dATP spontaneously forms nanoparticles in Mg-containing buffers that are taken into the vesicles of living cells and animals by energy-dependent processes. In cell cultures, photochemical activation with yellow laser light (561 nm) facilitated endosomal escape of TAMRA-dATP, resulting in its metabolic incorporation into DNA . In contrast, studies revealed that TAMRA-dATP is extensively trafficked by active pathways into cellular DNA of zebrafish () and where DNA labeling was observed in live animals, even without photochemical release. Metabolic labeling of DNA in whole, living animals can therefore be achieved by simply soaking animals in a buffer containing TAMRA-dATP or a structurally related compound, Cy3-dATP.
修饰后的核苷三磷酸(NTPs)是强大的探针和药物,但它们的阴离子特性阻碍了膜的通透性。因此,需要使用侵入性的传递技术、转运载体或前药策略来使用它们。在这里,我们提出了一种荧光 2'-脱氧核苷三磷酸 "TAMRA-dATP",它具有出人意料的高生物利用度。TAMRA-dATP 在含有镁的缓冲液中自发形成纳米颗粒,这些纳米颗粒通过能量依赖的过程被带入活细胞和动物的囊泡中。在细胞培养中,用黄色激光(561nm)进行光化学激活促进了 TAMRA-dATP 的内体逃逸,导致其代谢掺入 DNA。相比之下,研究表明 TAMRA-dATP 通过主动途径广泛地被运送到斑马鱼和 的细胞 DNA 中,在活体动物中观察到 DNA 标记,即使没有光化学释放。因此,只需将动物浸泡在含有 TAMRA-dATP 或结构上相关的化合物 Cy3-dATP 的缓冲液中,就可以实现对整个活体动物 DNA 的代谢标记。