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DNA 损伤诱导的噬菌素表达不依赖于 -缺失铜绿假单胞菌中的 RecA。

DNA Damage-Inducible Pyocin Expression Is Independent of RecA in -Deleted Pseudomonas aeruginosa.

机构信息

Department of Microbiology and Molecular Genetics, Oklahoma State Universitygrid.65519.3e, Stillwater, Oklahoma, USA.

出版信息

Microbiol Spectr. 2022 Aug 31;10(4):e0116722. doi: 10.1128/spectrum.01167-22. Epub 2022 Jun 16.

Abstract

Pyocins are interbacterial killing complexes made by Pseudomonas aeruginosa primarily to enact intraspecific competition. DNA damage and the ensuing activation of RecA initiate canonical pyocin expression. We recently discovered that deletion of , which encodes a tyrosine recombinase involved in chromosome decatenation, markedly elevates basal pyocin production independently of RecA. Interestingly, the already-elevated basal pyocin expression in Δ cells is substantially further increased by ciprofloxacin treatment. Here, we asked whether this further increase is due to DNA damage additionally activating the canonical RecA-dependent pyocin expression pathway. We also interrogated the relationship between XerC recombinase activity and pyocin expression. Surprisingly, we find that DNA damage-induced pyocin stimulation in Δ cells is independent of RecA but dependent on PrtN, implying a RecA-independent means of DNA damage sensing that activates pyocin expression via PrtN. In sharp contrast to the RecA independence of pyocin expression in Δ strains, specific mutational inactivation of XerC recombinase activity (XerC) caused modestly elevated basal pyocin expression and was further stimulated by DNA-damaging drugs, but both effects were fully RecA dependent. To test whether pyocins could be induced by chemically inactivating XerC, we deployed a previously characterized bacterial tyrosine recombinase inhibitor. However, the inhibitor did not activate pyocin expression even at growth-inhibitory concentrations, suggesting that its principal inhibitory activity resembles neither XerC absence nor enzymatic inactivation. Collectively, our results imply a second function of XerC, separate from its recombinase activity, whose absence permits RecA-independent but DNA damage-inducible pyocin expression. The opportunistic pathogen Pseudomonas aeruginosa produces pyocins-intraspecific, interbacterial killing complexes. The canonical pathway for pyocin production involves DNA damage and RecA activation. Pyocins are released by cell lysis, making production costly. We previously showed that cells lacking the tyrosine recombinase XerC produce pyocins independently of RecA. Here, we show that DNA-damaging agents stimulate pyocin expression in Δ strains without involving RecA. However, strains mutated for XerC recombinase activity display strictly RecA-dependent pyocin production, and a known bacterial tyrosine recombinase inhibitor does not elicit pyocin expression. Our results collectively suggest that the use of XerC inhibition as an antipseudomonal strategy will require targeting the second function of XerC in regulating noncanonical pyocin production rather than targeting its recombinase activity.

摘要

绿脓假单胞菌产生的噬菌体是一种细菌间杀伤复合物,主要用于实施种内竞争。DNA 损伤和随之而来的 RecA 激活启动了典型的噬菌体表达。我们最近发现,缺失编码参与染色体解缠的酪氨酸重组酶的基因 ,可独立于 RecA 显著提高基础噬菌体的产生。有趣的是,Δ细胞中已经升高的基础噬菌体表达水平在环丙沙星处理后进一步显著增加。在这里,我们想知道这种进一步的增加是否是由于 DNA 损伤另外激活了典型的 RecA 依赖性噬菌体表达途径。我们还研究了 XerC 重组酶活性与噬菌体表达之间的关系。令人惊讶的是,我们发现 Δ 细胞中 DNA 损伤诱导的噬菌体刺激不依赖于 RecA,但依赖于 PrtN,这意味着一种不依赖于 RecA 的 DNA 损伤感应方式,通过 PrtN 激活噬菌体表达。与 Δ 菌株中噬菌体表达的 RecA 独立性形成鲜明对比的是,XerC 重组酶活性的特异性突变失活(XerC)导致基础噬菌体表达略有升高,并被 DNA 损伤药物进一步刺激,但这两种效应都完全依赖于 RecA。为了测试化学失活 XerC 是否可以诱导噬菌体的产生,我们使用了以前表征的细菌酪氨酸重组酶抑制剂。然而,该抑制剂即使在抑制生长的浓度下也没有激活噬菌体的表达,这表明其主要抑制活性既不是 XerC 缺失也不是酶失活。总的来说,我们的结果暗示了 XerC 的第二个功能,与它的重组酶活性分开,其缺失允许不依赖于 RecA 但依赖于 DNA 损伤诱导的噬菌体表达。机会性病原体铜绿假单胞菌产生噬菌体——种内、细菌间杀伤复合物。噬菌体产生的典型途径涉及 DNA 损伤和 RecA 激活。噬菌体通过细胞裂解释放,因此产生是有代价的。我们之前曾表明,缺乏酪氨酸重组酶 XerC 的细胞独立于 RecA 产生噬菌体。在这里,我们表明,DNA 损伤剂刺激 Δ 菌株中的噬菌体表达而不涉及 RecA。然而,突变 XerC 重组酶活性的菌株显示严格依赖于 RecA 的噬菌体产生,并且已知的细菌酪氨酸重组酶抑制剂不能引发噬菌体的表达。我们的结果共同表明,将 XerC 抑制作为一种抗假单胞菌策略,将需要针对 XerC 调节非典型噬菌体产生的第二个功能,而不是针对其重组酶活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bef7/9431673/22fbb95278db/spectrum.01167-22-f001.jpg

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