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预测 RPE65 错义突变的潜在致病性:一种基于分子动力学模拟的计算策略。

Predicting potentially pathogenic effects of RPE65 missense mutations: a computational strategy based on molecular dynamics simulations.

机构信息

Department of Pharmacy, University of Pisa, Pisa, Italy.

Institute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy.

出版信息

J Enzyme Inhib Med Chem. 2022 Dec;37(1):1765-1772. doi: 10.1080/14756366.2022.2090547.

DOI:10.1080/14756366.2022.2090547
PMID:35726567
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9225791/
Abstract

The human retinal pigment epithelium-specific 65-kDa protein (RPE65) plays a crucial role within the retinoid visual cycle and several mutations affecting either its expression level or its enzymatic function are associated with inherited retinal diseases such as Retinitis Pigmentosa. The gene therapy product voretigene neparvovec (Luxturna) has been recently approved for treating hereditary retinal dystrophies; however, the treatment is currently accessible only to patients presenting confirmed biallelic mutations that severely impair RPE65 function, and many reported RPE65 missense mutations lack sufficient evidences for proving their pathogenicity. In this context, we developed a computational approach aimed at evaluating the potential pathogenic effect of RPE65 missense variants located on the dimerisation domain of the protein. The protocol evaluates how mutations may affect folding and conformation stability of this protein region, potentially helping clinicians to evaluate the eligibility for gene therapy of patients diagnosed with this type of RPE65 variant of uncertain significance.

摘要

人视网膜色素上皮细胞特异性 65kDa 蛋白(RPE65)在类视黄醇视觉循环中起着至关重要的作用,影响其表达水平或酶功能的几种突变与遗传性视网膜疾病有关,如色素性视网膜炎。基因治疗产品 voretigene neparvovec(Luxturna)最近已被批准用于治疗遗传性视网膜营养不良;然而,目前该治疗方法仅适用于具有严重损害 RPE65 功能的经证实的双等位基因突变的患者,并且许多报道的 RPE65 错义突变缺乏足够的证据证明其致病性。在这种情况下,我们开发了一种计算方法,旨在评估位于蛋白质二聚化结构域的 RPE65 错义变异体的潜在致病效应。该方案评估了突变如何影响该蛋白区域的折叠和构象稳定性,这可能有助于临床医生评估诊断为这种意义不明的 RPE65 变异体的患者进行基因治疗的资格。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/301edf87a499/IENZ_A_2090547_F0005_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/810735c903b3/IENZ_A_2090547_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/753f3edbf0b4/IENZ_A_2090547_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/4a1078cb4ae6/IENZ_A_2090547_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/a53fac5e6c4f/IENZ_A_2090547_F0004_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/301edf87a499/IENZ_A_2090547_F0005_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/810735c903b3/IENZ_A_2090547_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/753f3edbf0b4/IENZ_A_2090547_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/4a1078cb4ae6/IENZ_A_2090547_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/a53fac5e6c4f/IENZ_A_2090547_F0004_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850c/9225791/301edf87a499/IENZ_A_2090547_F0005_C.jpg

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Adv Ther. 2022 Mar;39(3):1179-1198. doi: 10.1007/s12325-021-02036-7. Epub 2022 Jan 30.
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