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一种用于子宫内膜癌的新型雌激素/孕激素相关预后标志物的综合分析与实验验证

Comprehensive Analysis and Experimental Validation of a Novel Estrogen/Progesterone-Related Prognostic Signature for Endometrial Cancer.

作者信息

Yu Jing, Yao Hong-Wen, Liu Ting-Ting, Wang Di, Shi Jian-Hong, Yuan Guang-Wen, Ma Sai, Wu Ling-Ying

机构信息

Department of Gynecologic Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100021, China.

Department of Blood Grouping, Beijing Red Cross Blood Center, Beijing 100088, China.

出版信息

J Pers Med. 2022 May 31;12(6):914. doi: 10.3390/jpm12060914.

Abstract

Estrogen and progesterone are the major determinants of the occurrence and development of endometrial cancer (EC), which is one of the most common gynecological cancers worldwide. Our purpose was to develop a novel estrogen/progesterone-related gene signature to better predict the prognosis of EC and help discover effective therapeutic strategies. We downloaded the clinical and RNA-seq data of 397 EC patients from The Cancer Genome Atlas (TCGA) database. The "limma" R package was used to screen for estrogen/progesterone-related differentially expressed genes (DEGs) between EC and normal tissues. Univariate and multivariate Cox proportional hazards regression analyses were applied to identify these DEGs that were associated with prognosis; then, a novel estrogen/progesterone-related prognostic signature comprising , , , and was established. The Kaplan-Meier (KM) survival analysis showed that the low-risk group identified by this signature had significantly longer overall survival (OS) than the high-risk group; the receiver operating characteristic (ROC) and risk distribution curves suggested this signature was an accurate predictor independent of risk factors. A nomogram incorporating the signature risk score and stage was constructed, and the calibration plot suggested it could accurately predict the survival rate. Compared with normal tissues, tumor tissues had increased mRNA levels of and and a reduced mRNA level of . The knockdown of PRXL2A and GNG3 significantly inhibited the proliferation and colony formation of Ishikawa and AN3CA cells, while the inhibition of PRXL2A expression suppressed xenograft growth. In this study, five estrogen/progesterone-related genes were identified and incorporated into a novel signature, which provided a new classification tool for improved risk assessment and potential molecular targets for EC therapies.

摘要

雌激素和孕激素是子宫内膜癌(EC)发生和发展的主要决定因素,子宫内膜癌是全球最常见的妇科癌症之一。我们的目的是开发一种新的雌激素/孕激素相关基因特征,以更好地预测EC的预后,并帮助发现有效的治疗策略。我们从癌症基因组图谱(TCGA)数据库下载了397例EC患者的临床和RNA测序数据。使用“limma”R包筛选EC组织与正常组织之间雌激素/孕激素相关的差异表达基因(DEG)。应用单变量和多变量Cox比例风险回归分析来识别与预后相关的这些DEG;然后,建立了一个包含 、 、 、 和 的新的雌激素/孕激素相关预后特征。Kaplan-Meier(KM)生存分析表明,由该特征识别出的低风险组的总生存期(OS)明显长于高风险组;受试者工作特征(ROC)和风险分布曲线表明该特征是一个独立于风险因素的准确预测指标。构建了一个包含特征风险评分和分期的列线图,校准图表明它可以准确预测生存率。与正常组织相比,肿瘤组织中 和 的mRNA水平升高,而 的mRNA水平降低。敲低PRXL2A和GNG3显著抑制了Ishikawa和AN3CA细胞的增殖和集落形成,而抑制PRXL2A表达则抑制了异种移植瘤的生长。在本研究中,鉴定了五个雌激素/孕激素相关基因并将其纳入一个新的特征中,这为改善风险评估提供了一种新的分类工具,并为EC治疗提供了潜在的分子靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76a7/9225250/4712e0ce5dc5/jpm-12-00914-g001.jpg

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