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同时估计两个氢键几何结构从对纠缠的 NMR 参数:测试案例的 4-羟基吡啶阴离子。

Simultaneous Estimation of Two Coupled Hydrogen Bond Geometries from Pairs of Entangled NMR Parameters: The Test Case of 4-Hydroxypyridine Anion.

机构信息

Institute of Chemistry, St. Petersburg State University, 199034 St. Petersburg, Russia.

Department of Chemistry, Ben-Gurion University of the Negev, Beer-Sheva 84105, Israel.

出版信息

Molecules. 2022 Jun 18;27(12):3923. doi: 10.3390/molecules27123923.

Abstract

The computational method for estimating the geometry of two coupled hydrogen bonds with geometries close to linear using a pair of spectral NMR parameters was proposed. The method was developed based on the quantum-chemical investigation of 61 complexes with two hydrogen bonds formed by oxygen and nitrogen atoms of the 4-hydroxypyridine anion with OH groups of substituted methanols. The main idea of the method is as follows: from the NMR chemical shifts of nuclei of atoms forming the 4-hydroxylpyridine anion, we select such pairs, whose values can be used for simultaneous determination of the geometry of two hydrogen bonds, despite the fact that every NMR parameter is sensitive to the geometry of each of the hydrogen bonds. For these parameters, two-dimensional maps of dependencies of NMR chemical shifts on interatomic distances in two hydrogen bonds were constructed. It is shown that, in addition to chemical shifts of the nitrogen atom and quaternary carbon, which are experimentally difficult to obtain, chemical shifts of the carbons and protons of the CH groups can be used. The performance of the proposed method was evaluated computationally as well on three additional complexes with substituted alcohols. It was found that, for all considered cases, hydrogen bond geometries estimated using two-dimensional correlations differed from those directly calculated by quantum-chemical methods by not more than 0.04 Å.

摘要

提出了一种使用一对光谱 NMR 参数来估算具有接近线性几何形状的两个耦合氢键的几何形状的计算方法。该方法是基于对 61 个由含氧和氮原子的 4-羟基吡啶阴离子与取代甲醇的 OH 基团形成的两个氢键的复合物的量子化学研究而开发的。该方法的主要思想如下:从形成 4-羟基吡啶阴离子的原子的核 NMR 化学位移中,我们选择了这样的对,其值可用于同时确定两个氢键的几何形状,尽管每个 NMR 参数都对每个氢键的几何形状敏感。对于这些参数,构建了两个氢键中 NMR 化学位移与原子间距离的二维依赖关系图。结果表明,除了实验上难以获得的氮原子和季碳原子的化学位移外,CH 基团的碳和质子的化学位移也可以使用。还通过计算对三个具有取代醇的附加复合物评估了所提出方法的性能。结果发现,对于所有考虑的情况,使用二维相关估算的氢键几何形状与直接通过量子化学方法计算的几何形状之间的差异不超过 0.04 Å。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c63/9229270/2b11ee80d518/molecules-27-03923-g001.jpg

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