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全外显子组测序解析伊朗西南部患者视力障碍的遗传特征。

Whole-exome sequencing deciphers the genetic profile of visual impairments in patients from Southwest Iran.

机构信息

Department of Biology, Faculty of Science, Shahid Chamran University of Ahvaz, Ahvaz, Iran.

Narges Medical Genetics and Prenatal Diagnosis Laboratory, Ahvaz, Iran.

出版信息

Mol Genet Genomics. 2022 Sep;297(5):1289-1300. doi: 10.1007/s00438-022-01917-y. Epub 2022 Jun 26.

Abstract

Genetic ocular diseases are heterogeneous disorders. Recent advances have led to a paradigm shift in the discovery of eye disease-associated genetic variants from linkage and genome-wide association studies to next-generation sequencing-based genome studies. The aim of the current study was to investigate the spectrum of possible vision impairment-related variants in 66 Iranian patients. Whole-exome sequencing (WES) technology followed by bioinformatics analysis, Sanger validation, and co-segregation study were done to find eye disease-causing variants in the patients with vision impairments from Southwest Iran. WES revealed disease-causing variants in 82% of the enrolled cases. WES of understudied cohorts presented an effective strategy for determining pathogenic variants in heterogeneous eye diseases and demonstrated the distribution of causative genetic mutations in Iranian patients. The present data could provide the potential to accelerate genetic screening and a reference for treatment modalities for patients with different types of eye disorders from Southwest Iran.

摘要

遗传性眼病是异质性疾病。最近的进展使得通过连锁和全基因组关联研究发现与眼病相关的遗传变异的方法从基于下一代测序的基因组研究发生了转变。本研究的目的是调查 66 名伊朗患者中可能与视力损害相关的变异谱。对来自伊朗西南部视力受损的患者进行全外显子组测序 (WES) 技术,随后进行生物信息学分析、Sanger 验证和共分离研究,以寻找致盲相关的变异。WES 发现 82%的入组病例存在致病变异。对研究较少的队列进行 WES 分析是确定异质性眼病中致病变异的有效策略,并证明了伊朗患者中致病基因突变的分布。本数据可能为来自伊朗西南部不同类型眼部疾病的患者的遗传筛查和治疗方式提供参考。

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