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基于网络药理学和分子动力学模拟,益气清热滋阴方的活性成分黄芩苷可能保护萎缩性鼻炎患者免受认知障碍。

Based on Network Pharmacology and Molecular Dynamics Simulations, Baicalein, an Active Ingredient of Yiqi Qingre Ziyin Method, Potentially Protects Patients With Atrophic Rhinitis From Cognitive Impairment.

作者信息

Kang Xueran, Sun Yuxing, Yi Bin, Jiang Chenyan, Yan Xiaojun, Chen Bin, Lu Lixing, Shi Fangze, Luo Yuanbo, Chen Yisheng, Wang Qian, Shi Runjie

机构信息

Department of Otorhinolaryngology Head and Neck Surgery, Shanghai Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

Shanghai Key Laboratory of Translational Medicine on Ear and Nose Diseases, Ear Institute Shanghai Jiao Tong University School of Medicine, Shanghai, China.

出版信息

Front Aging Neurosci. 2022 Jun 10;14:880794. doi: 10.3389/fnagi.2022.880794. eCollection 2022.

Abstract

Cognition may be improved by the active ingredients of the Yiqi Qingre Ziyin method in patients with atrophic rhinitis (AR). This study aimed to identify potential targets of the Yiqi Qingre Ziyin method for the treatment of patients with cognitive impairment. Nasal mucosal tissue samples from patients with AR were subjected to proteomic assays, and differentially expressed proteins were obtained. To explore the mechanism of AR leading to mild cognitive impairment (MCI), a differential analysis of AR related differential proteins in the MCI related GSE140831 dataset was performed. Most AR-related differential proteins are also differentially expressed in peripheral blood tissues of MCI, have similar biological functions and are enriched in similar pathways. These co-expressed differential factors in AR and MCI are known as common differential proteins of AR and MCI (CDPAM). Based on the analysis and validation of the random forest, support vector machine and neural network models, CDPAM acted as a diagnostic marker for MCI risk. Cytochrome C (CYCS) was significantly upregulated in the peripheral blood of patients with MCI. The active ingredients in the Yiqi Qingre Ziqin method were obtained and targeted 137 proteins. Among these targeted proteins, belong to the CDPAM set. Molecular docking and molecular dynamics analysis revealed that baicalein, an active ingredient in the Yiqi Qingre Ziyin method, stably targeted the CYCS protein. Results of the enrichment analysis revealed that the up-regulation of expression may have a defensive effect on the cells to resist foreign stimuli. Therefore, baicalein, an active ingredient in the Yiqi Qingre Ziyin method, may prevent the development and progression of MCI by targeting the CYCS protein.

摘要

益气清热滋阴法的有效成分可能改善萎缩性鼻炎(AR)患者的认知功能。本研究旨在确定益气清热滋阴法治疗认知障碍患者的潜在靶点。对AR患者的鼻黏膜组织样本进行蛋白质组学分析,获得差异表达蛋白。为探究AR导致轻度认知障碍(MCI)的机制,对MCI相关GSE140831数据集中与AR相关的差异蛋白进行差异分析。大多数与AR相关的差异蛋白在MCI的外周血组织中也有差异表达,具有相似的生物学功能且富集于相似的通路。AR和MCI中这些共表达的差异因子被称为AR和MCI的共同差异蛋白(CDPAM)。基于随机森林、支持向量机和神经网络模型的分析与验证,CDPAM作为MCI风险的诊断标志物。细胞色素C(CYCS)在MCI患者的外周血中显著上调。获得了益气清热滋阴法中的有效成分,并靶向137种蛋白质。在这些靶向蛋白中, 属于CDPAM集合。分子对接和分子动力学分析表明,益气清热滋阴法中的活性成分黄芩苷可稳定靶向CYCS蛋白。富集分析结果显示, 表达的上调可能对细胞抵抗外界刺激具有防御作用。因此,益气清热滋阴法中的活性成分黄芩苷可能通过靶向CYCS蛋白来预防MCI的发生和发展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f45/9226445/bf4aaa29c3cd/fnagi-14-880794-g001.jpg

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