Parvej Hasan, Begum Shahnaz, Dalui Ramkrishna, Paul Swarnali, Mondal Barun, Sardar Subrata, Sepay Nayim, Maiti Gourhari, Halder Umesh Chandra
Department of Chemistry, Jadavpur University Kolkata 700 032 India
Department of Chemistry, Lady Brabourne College Kolkata 700017 India.
RSC Adv. 2022 Jun 8;12(27):17020-17028. doi: 10.1039/d2ra01029a. eCollection 2022 Jun 7.
The binding of a small molecule to a protein through non-covalent interactions mainly depends on its size and electronic environment. Such binding can change the stability of the three dimensional protein structure which sometimes may destabilize it to accelerate or to inhibit protein aggregation. Coumarin is a widely used fluorescent dye with several biological applications. Different substituents (electron-donating and electron-withdrawing) at different positions of the coumarin moiety can influence its molecular volume, physical and chemical properties. Here we investigate the effect of such substituents of coumarin on the aggregation of a model protein, beta-lactoglobulin (β-lg) through a multi spectroscopic approach. It was observed that coumarin methyl ester with an 8-hydroxyl group can inhibit the β-lg aggregation. This compound can bind the hydrophobic site of beta-lactoglobulin and stabilize a particular protein conformation through the formation of hydrogen bond and hydrophobic interactions. Thus a properly designed compound can inhibit protein-protein interactions through protein-small molecule interactions. Other coumarinoid compounds also are effective in the prevention of thermal aggregation of β-lg.
小分子通过非共价相互作用与蛋白质结合主要取决于其大小和电子环境。这种结合会改变蛋白质三维结构的稳定性,有时可能使其不稳定,从而加速或抑制蛋白质聚集。香豆素是一种广泛应用于多种生物学领域的荧光染料。香豆素部分不同位置的不同取代基(供电子和吸电子)会影响其分子体积、物理和化学性质。在此,我们通过多种光谱方法研究香豆素的此类取代基对模型蛋白β-乳球蛋白(β-lg)聚集的影响。观察到带有8-羟基的香豆素甲酯可抑制β-lg聚集。该化合物可结合β-乳球蛋白的疏水位点,并通过形成氢键和疏水相互作用稳定特定的蛋白质构象。因此,一种经过合理设计的化合物可通过蛋白质-小分子相互作用抑制蛋白质-蛋白质相互作用。其他香豆素类化合物在预防β-lg的热聚集方面也很有效。