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豆科(Fabaceae)一种IRLC豆科植物叶绿体全基因组的特征分析

Characterization of the complete chloroplast genome of (Fabaceae): an IRLC legumes.

作者信息

Zhu Shanshan, Liu Aowei, Xie Xiao, Xia Maoqin, Chen Haimin

机构信息

Systematic & Evolutionary Botany and Biodiversity Group, MOE Laboratory of Biosystem Homeostasis and Protection, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang, China.

School of Marine Sciences, Ningbo University, Ningbo, Zhejiang, China.

出版信息

Mitochondrial DNA B Resour. 2022 Jun 20;7(6):1137-1139. doi: 10.1080/23802359.2022.2079436. eCollection 2022.

Abstract

The inverted repeat-lacking clade (IRLC) species are characterized by the loss of an IR region in their plastomes, which has long been of great interest. is one of the members of the tribe Wisterieae, which belongs to Fabaceae and is well-known as IRLC. Here, we reported and characterized the complete chloroplast genome of using the genome skimming approach. The chloroplast genome is 132,477 bp in length and lacks one copy of IR region. The genome encoded 112 unique genes including 89 protein-coding genes, 29 transfer RNA genes and four ribosomal RNA genes. Phylogenetic results supported the monophyly of the tribe Wisterieae (IRLC) and confirmed that belongs to the genus .

摘要

缺乏反向重复序列的分支(IRLC)物种的特征是其质体基因组中IR区域的缺失,这长期以来一直备受关注。[物种名称]是紫藤族的成员之一,属于豆科,以IRLC而闻名。在这里,我们使用基因组鸟枪法测序方法报道并表征了[物种名称]的完整叶绿体基因组。叶绿体基因组长度为132,477 bp,缺少一个IR区域拷贝。该基因组编码112个独特基因,包括89个蛋白质编码基因、29个转运RNA基因和4个核糖体RNA基因。系统发育结果支持紫藤族(IRLC)的单系性,并证实[物种名称]属于[属名]属。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/beca/9225703/3d239752ef98/TMDN_A_2079436_F0001_C.jpg

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