El-Malah Shimaa S, Saththasivam Jayaprakash, Jabbar Khadeeja Abdul, K K Arun, Gomez Tricia A, Ahmed Ayeda A, Mohamoud Yasmin A, Malek Joel A, Abu Raddad Laith J, Abu Halaweh Hussein A, Bertollini Roberto, Lawler Jenny, Mahmoud Khaled A
Qatar Environment and Energy Research Institute (QEERI), Hamad Bin Khalifa University, Qatar Foundation, P.O. Box 34110, Doha, Qatar.
Genomics Laboratory, Weill Cornell Medicine-Qatar (WCM-Q), Cornell University, Doha, Qatar.
Environ Technol Innov. 2022 Aug;27:102775. doi: 10.1016/j.eti.2022.102775. Epub 2022 Jun 22.
The apparent uncertainty associated with shedding patterns, environmental impacts, and sample processing strategies have greatly influenced the variability of SARS-CoV-2 concentrations in wastewater. This study evaluates the use of a new normalization approach using human RNase P for the logic estimation of SARS-CoV-2 viral load in wastewater. SARS-CoV-2 variants outbreak was monitored during the circulating wave between February and August 2021. Sewage samples were collected from five major wastewater treatment plants and subsequently analyzed to determine the viral loads in the wastewater. SARS-CoV-2 was detected in all the samples where the wastewater Ct values exhibited a similar trend as the reported number of new daily positive cases in the country. The infected population number was estimated using a mathematical model that compensated for RNA decay due to wastewater temperature and sewer residence time, and which indicated that the number of positive cases circulating in the population declined from 765,729 ± 142,080 to 2,303 ± 464 during the sampling period. Genomic analyses of SARS-CoV-2 of thirty wastewater samples collected between March 2021 and April 2021 revealed that alpha (B.1.1.7) and beta (B.1.351) were among the dominant variants of concern (VOC) in Qatar. The findings of this study imply that the normalization of data allows a more realistic assessment of incidence trends within the population.
与病毒脱落模式、环境影响和样本处理策略相关的明显不确定性,极大地影响了废水中SARS-CoV-2浓度的变异性。本研究评估了一种使用人类核糖核酸酶P的新标准化方法,用于合理估算废水中SARS-CoV-2病毒载量。在2021年2月至8月的传播期间对SARS-CoV-2变体爆发进行了监测。从五个主要污水处理厂采集污水样本,随后进行分析以确定废水中的病毒载量。在所有样本中均检测到SARS-CoV-2,其中废水Ct值与该国每日新增阳性病例数呈现出相似趋势。使用一个数学模型估算感染人口数量,该模型补偿了由于废水温度和下水道停留时间导致的RNA衰变,结果表明在采样期间,人群中传播的阳性病例数从765,729±142,080降至2,303±464。对2021年3月至2021年4月期间采集的30份废水样本进行的SARS-CoV-2基因组分析显示,阿尔法(B.1.1.7)和贝塔(B.1.351)是卡塔尔主要的关注变体(VOC)。本研究结果表明,数据标准化能够更实际地评估人群中的发病趋势。