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鉴定独联体样病毒在独脚金和其他植物的转录组数据中。

Identification of dicistro-like viruses in the transcriptome data of Striga asiatica and other plants.

出版信息

Acta Virol. 2022;66(2):157-165. doi: 10.4149/av_2022_205.

Abstract

Dicistroviruses (the family Dicistroviridae) are positive-sense single-stranded RNA viruses of the order Picornavirales, which is a rapidly growing viral group. They have been detected in a wide range of animals, predominantly in insects and crustaceans. In this study, we identified the genome sequences of 14 dicistro-like viruses in the transcriptome data from 12 plant species, including Striga asiatica dicistro-like virus 1 and 2 identified in the transcriptome data of Striga asiatica. Sequence comparison and phylogenetic analysis indicated that these 14 plant-associated dicistro-like viruses were novel members of the family Dicistroviridae, five of which are placed within the genera Aparavirus and Cripavirus, which mainly consist of viruses infecting animals, including insects. The other nine plant dicistro-like viruses formed clades with unclassified dicistroviruses. Our study implies that a wide range of plant species may serve as hosts for dicistroviruses or reservoirs for their transmission. Keywords: dicistrovirus; Dicistroviridae; plant; transcriptome; Striga asiatica.

摘要

双顺反子病毒(Dicistroviridae 科)是正链单股 RNA 病毒,属于小 RNA 病毒目(Picornavirales),这是一个快速增长的病毒群。它们已在多种动物中被发现,主要存在于昆虫和甲壳类动物中。在这项研究中,我们从 12 种植物的转录组数据中鉴定出了 14 种双顺反子样病毒的基因组序列,包括在 Striga asiatica 的转录组数据中鉴定出的 Striga asiatica dicistro-like virus 1 和 2。序列比较和系统发育分析表明,这 14 种与植物相关的双顺反子样病毒是 Dicistroviridae 科的新成员,其中 5 种属于 Aparavirus 和 Cripavirus 属,这些属主要由感染动物的病毒组成,包括昆虫。其他 9 种植物双顺反子样病毒与未分类的双顺反子病毒形成聚类。我们的研究表明,广泛的植物物种可能是双顺反子病毒的宿主或传播的宿主。关键词:双顺反子病毒;双顺反子病毒科;植物;转录组;Striga asiatica。

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