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Translocation breakpoint disrupting the host SNHG14 gene but not coding genes or snoRNAs in typical Prader-Willi syndrome.典型普拉德-威利综合征中易位断点破坏宿主 SNHG14 基因但不破坏编码基因或 snoRNAs。
J Hum Genet. 2019 Jul;64(7):647-652. doi: 10.1038/s10038-019-0596-2. Epub 2019 Apr 15.
2
Common variation within the SETBP1 gene is associated with reading-related skills and patterns of functional neural activation.SETBP1 基因内的常见变异与阅读相关技能和功能神经激活模式有关。
Neuropsychologia. 2019 Jul;130:44-51. doi: 10.1016/j.neuropsychologia.2018.07.015. Epub 2018 Aug 23.
3
The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.与人类先天性异常相关的平衡细胞遗传学异常的基因组格局。
Nat Genet. 2017 Jan;49(1):36-45. doi: 10.1038/ng.3720. Epub 2016 Nov 14.
4
Precise detection of chromosomal translocation or inversion breakpoints by whole-genome sequencing.通过全基因组测序精确检测染色体易位或倒位断点。
J Hum Genet. 2014 Dec;59(12):649-54. doi: 10.1038/jhg.2014.88. Epub 2014 Oct 9.
5
Refining analyses of copy number variation identifies specific genes associated with developmental delay.对拷贝数变异分析的细化鉴定出与发育迟缓相关的特定基因。
Nat Genet. 2014 Oct;46(10):1063-71. doi: 10.1038/ng.3092. Epub 2014 Sep 14.
6
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration.综合基因组浏览器(IGV):高性能基因组学数据可视化和探索。
Brief Bioinform. 2013 Mar;14(2):178-92. doi: 10.1093/bib/bbs017. Epub 2012 Apr 19.
7
372 kb microdeletion in 18q12.3 causing SETBP1 haploinsufficiency associated with mild mental retardation and expressive speech impairment.18q12.3区域372 kb的微缺失导致SETBP1单倍体不足,与轻度智力障碍和表达性言语障碍相关。
Eur J Med Genet. 2012 Mar;55(3):216-21. doi: 10.1016/j.ejmg.2012.01.005. Epub 2012 Jan 25.
8
Reduced expression by SETBP1 haploinsufficiency causes developmental and expressive language delay indicating a phenotype distinct from Schinzel-Giedion syndrome.由于 SETBP1 杂合性不足导致的表达减少引起发育性和表达性语言延迟,表明其表型与 Schinzel-Giedion 综合征不同。
J Med Genet. 2011 Feb;48(2):117-22. doi: 10.1136/jmg.2010.084582. Epub 2010 Oct 30.
9
De novo mutations of SETBP1 cause Schinzel-Giedion syndrome.SETBP1 基因中的新生突变导致辛基尔-吉迪恩综合征。
Nat Genet. 2010 Jun;42(6):483-5. doi: 10.1038/ng.581. Epub 2010 May 2.
10
BreakDancer: an algorithm for high-resolution mapping of genomic structural variation.BreakDancer:一种用于基因组结构变异高分辨率图谱绘制的算法。
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一名患有言语障碍、智力和行为障碍的患者因新发平衡易位导致的新型基因破坏

A Novel Gene Disruption by a De Novo Balanced Translocation in a Patient with Speech Impairment, Intellectual, and Behavioral Disorder.

作者信息

Vrkić Boban Ivona, Sekiguchi Futoshi, Lozić Mirela, Miyake Noriko, Matsumoto Naomichi, Lozić Bernarda

机构信息

Department of Pediatrics, University Hospital of Split, Split, Croatia.

Department of Human Genetics, Yokohama City University Graduate School of Medicine, Kanazawa-ku, Yokohama, Japan.

出版信息

J Pediatr Genet. 2020 Aug 31;11(2):135-138. doi: 10.1055/s-0040-1715639. eCollection 2022 Jun.

DOI:10.1055/s-0040-1715639
PMID:35769969
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9236750/
Abstract

Balanced chromosomal abnormalities (BCAs) can disrupt gene function resulting in disease. To date, BCA disrupting the ( ) gene has not been reported. On the other hand, de novo heterozygous variants in the highly conserved 11-bp region in can result in the Schinzel-Giedion syndrome. This condition is characterized by severe intellectual disability, a characteristic face, and multiple-system anomalies. Further other types of mutations involving are associated with a different phenotype, mental retardation, autosomal dominant 29 (MRD29), which has mild dysmorphic features, developmental delay, and behavioral disorders. Here we report a male patient who has moderate intellectual disability, mild behavioral difficulties, and severe expressive speech impairment resulting from a de novo balanced chromosome translocation, t(12;18)(q22;q12.3). By whole genome sequencing, we determined the breakpoints at the nucleotide level. The 18q12.3 breakpoint was located between exons 2 and 3 of . Phenotypic features of our patient are compatible with those with MRD29. This is the first reported BCA disrupting .

摘要

平衡染色体异常(BCAs)可破坏基因功能从而导致疾病。迄今为止,尚未报道过破坏( )基因的BCA。另一方面,( )中高度保守的11个碱基区域的新生杂合变异可导致申泽尔 - 吉迪恩综合征。这种病症的特征为严重智力残疾、特殊面容和多系统异常。此外,涉及( )的其他类型突变与不同的表型相关,即智力迟钝、常染色体显性29型(MRD29),其具有轻度畸形特征、发育迟缓及行为障碍。在此,我们报告一名男性患者,他因新生平衡染色体易位t(12;18)(q22;q12.3)而患有中度智力残疾、轻度行为困难及严重的表达性言语障碍。通过全基因组测序,我们在核苷酸水平确定了断点。18q12.3断点位于( )的外显子2和3之间。我们患者的表型特征与MRD29患者相符。这是首次报道的破坏( )的BCA。