Department of Chemistry, Stanford University, United States.
Division of CryoEM and Bioimaging, Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, United States.
J Struct Biol. 2022 Sep;214(3):107881. doi: 10.1016/j.jsb.2022.107881. Epub 2022 Jul 8.
Cryogenic correlative light and electron microscopy (cryo-CLEM) seeks to leverage orthogonal information present in two powerful imaging modalities. While recent advances in cryogenic electron microscopy (cryo-EM) allow for the visualization and identification of structures within cells at the nanometer scale, information regarding the cellular environment, such as pH, membrane potential, ionic strength, etc., which influences the observed structures remains absent. Fluorescence microscopy can potentially be used to reveal this information when specific labels, known as fluorescent biosensors, are used, but there has been minimal use of such biosensors in cryo-CLEM to date. Here we demonstrate the applicability of one such biosensor, the fluorescent protein roGFP2, for cryo-CLEM experiments. At room temperature, the ratio of roGFP2 emission brightness when excited at 425 nm or 488 nm is known to report on the local redox potential. When samples containing roGFP2 are rapidly cooled to 77 K in a manner compatible with cryo-EM, the ratio of excitation peaks remains a faithful indicator of the redox potential at the time of freezing. Using purified protein in different oxidizing/reducing environments, we generate a calibration curve which can be used to analyze in situ measurements. As a proof-of-principle demonstration, we investigate the oxidation/reduction state within vitrified Caulobacter crescentus cells. The polar organizing protein Z (PopZ) localizes to the polar regions of C. crescentus where it is known to form a distinct microdomain. By expressing an inducible roGFP2-PopZ fusion we visualize individual microdomains in the context of their redox environment.
低温相关光电子显微镜(cryo-CLEM)旨在利用两种强大成像模式中存在的正交信息。虽然最近的低温电子显微镜(cryo-EM)进展允许在纳米尺度上可视化和识别细胞内的结构,但关于细胞环境的信息,如 pH 值、膜电位、离子强度等,这些信息会影响观察到的结构,但目前仍缺乏这些信息。当使用特定的标签,即荧光生物传感器时,荧光显微镜可以潜在地用于揭示这些信息,但迄今为止,在低温 CLEM 中很少使用这种生物传感器。在这里,我们展示了一种荧光生物传感器 roGFP2 在低温 CLEM 实验中的适用性。在室温下,当用 425nm 或 488nm 激发时,roGFP2 发射亮度的比值被认为可以报告局部氧化还原电位。当用与 cryo-EM 兼容的方式将含有 roGFP2 的样品快速冷却至 77 K 时,激发峰的比值仍然是冷冻时氧化还原电位的忠实指标。我们在不同的氧化/还原环境中使用纯化的蛋白质生成校准曲线,可以用来分析原位测量。作为原理验证演示,我们研究了玻璃化 Caulobacter crescentus 细胞内的氧化/还原状态。极性组织蛋白 Z(PopZ)定位于 C. crescentus 的极性区域,在那里它被知形成一个独特的微区。通过表达可诱导的 roGFP2-PopZ 融合,我们在其氧化还原环境下可视化单个微区。