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鉴定 PAmKate 为一种用于低温超高分辨率成像的红色光激活荧光蛋白。

Identification of PAmKate as a Red Photoactivatable Fluorescent Protein for Cryogenic Super-Resolution Imaging.

机构信息

Department of Chemistry , Stanford University , Stanford , California 94305 , United States.

Department of Developmental Biology , Stanford University School of Medicine , Stanford , California 94305 , United States.

出版信息

J Am Chem Soc. 2018 Oct 3;140(39):12310-12313. doi: 10.1021/jacs.8b05960. Epub 2018 Sep 20.

DOI:10.1021/jacs.8b05960
PMID:30222332
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6174896/
Abstract

Single-molecule super-resolution fluorescence microscopy conducted in vitrified samples at cryogenic temperatures offers enhanced localization precision due to reduced photobleaching rates, a chemical-free and rapid fixation method, and the potential of correlation with cryogenic electron microscopy. Achieving cryogenic super-resolution microscopy requires the ability to control the sparsity of emissive labels at cryogenic temperatures. Obtaining this control presents a key challenge for the development of this technique. In this work, we identify a red photoactivatable protein, PAmKate, which remains activatable at cryogenic temperatures. We characterize its activation as a function of temperature and find that activation is efficient at cryogenic and room temperatures. We perform cryogenic super-resolution experiments in situ, labeling PopZ, a protein known to assemble into a microdomain at the poles of the model bacterium Caulobacter crescentus. We find improved localization precision at cryogenic temperatures compared to room temperature by a factor of 4, attributable to reduced photobleaching.

摘要

在低温下进行的玻璃化冷冻样品的单分子超分辨率荧光显微镜技术,由于降低了光漂白率、采用了无化学试剂的快速固定方法,以及与低温电子显微镜相关联的潜力,提供了更高的定位精度。实现低温超分辨率显微镜需要能够在低温下控制发射标记的稀疏度。获得这种控制对于该技术的发展提出了一个关键的挑战。在这项工作中,我们鉴定了一种红色光可激活蛋白 PAmKate,它在低温下仍然可以被激活。我们研究了其激活与温度的关系,并发现其在低温和室温下都具有高效的激活能力。我们在原位进行了低温超分辨率实验,标记了 PopZ,这是一种已知在模型细菌新月柄杆菌的两极组装成微区的蛋白质。与室温相比,我们发现低温下的定位精度提高了 4 倍,这归因于光漂白的减少。

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本文引用的文献

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2
Cryogenic optical localization provides 3D protein structure data with Angstrom resolution.低温光学定位提供了具有埃分辨率的 3D 蛋白质结构数据。
Nat Methods. 2017 Feb;14(2):141-144. doi: 10.1038/nmeth.4141. Epub 2017 Jan 9.
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Three-dimensional super-resolution protein localization correlated with vitrified cellular context.
Curr Opin Struct Biol. 2024 Dec;89:102934. doi: 10.1016/j.sbi.2024.102934. Epub 2024 Oct 3.
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The advent of preventive high-resolution structural histopathology by artificial-intelligence-powered cryogenic electron tomography.通过人工智能驱动的低温电子断层扫描实现预防性高分辨率结构组织病理学的出现。
Front Mol Biosci. 2024 May 29;11:1390858. doi: 10.3389/fmolb.2024.1390858. eCollection 2024.
5
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bioRxiv. 2024 Aug 31:2024.04.24.590965. doi: 10.1101/2024.04.24.590965.
6
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7
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Metallic support films reduce optical heating in cryogenic correlative light and electron tomography.金属支撑膜减少低温相关光电子断层扫描中的光学加热。
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