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AACR Project GENIE:10 万例及以上。

AACR Project GENIE: 100,000 Cases and Beyond.

机构信息

Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, Canada.

Ontario Institute for Cancer Research, Toronto, Ontario, Canada.

出版信息

Cancer Discov. 2022 Sep 2;12(9):2044-2057. doi: 10.1158/2159-8290.CD-21-1547.

DOI:10.1158/2159-8290.CD-21-1547
PMID:35819403
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9437568/
Abstract

UNLABELLED

The American Association for Cancer Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) is an international pan-cancer registry with the goal to inform cancer research and clinical care worldwide. Founded in late 2015, the milestone GENIE 9.1-public release contains data from >110,000 tumors from >100,000 people treated at 19 cancer centers from the United States, Canada, the United Kingdom, France, the Netherlands, and Spain. Here, we demonstrate the use of these real-world data, harmonized through a centralized data resource, to accurately predict enrollment on genome-guided trials, discover driver alterations in rare tumors, and identify cancer types without actionable mutations that could benefit from comprehensive genomic analysis. The extensible data infrastructure and governance framework support additional deep patient phenotyping through biopharmaceutical collaborations and expansion to include new data types such as cell-free DNA sequencing. AACR Project GENIE continues to serve a global precision medicine knowledge base of increasing impact to inform clinical decision-making and bring together cancer researchers internationally.

SIGNIFICANCE

AACR Project GENIE has now accrued data from >110,000 tumors, placing it among the largest repository of publicly available, clinically annotated genomic data in the world. GENIE has emerged as a powerful resource to evaluate genome-guided clinical trial design, uncover drivers of cancer subtypes, and inform real-world use of genomic data. This article is highlighted in the In This Issue feature, p. 2007.

摘要

未加标签

美国癌症研究协会(AACR)项目基因组学证据肿瘤信息交换(GENIE)是一个国际性的泛癌登记处,旨在为全球癌症研究和临床护理提供信息。该项目成立于 2015 年末,里程碑式的 GENIE 9.1 公开版本包含了来自美国、加拿大、英国、法国、荷兰和西班牙的 19 个癌症中心的超过 11 万名患者的超过 11 万个肿瘤的数据。在这里,我们展示了如何利用这些通过集中数据资源进行协调的真实世界数据,准确预测基因组指导试验的入组情况,发现罕见肿瘤中的驱动性改变,并确定没有可操作突变但可能受益于全面基因组分析的癌症类型。可扩展的数据基础设施和治理框架支持通过生物制药合作进行额外的深度患者表型分析,并扩展到包括游离 DNA 测序等新的数据类型。AACR 项目 GENIE 继续为全球精准医学知识库提供服务,其影响力不断增加,为临床决策提供信息,并将国际癌症研究人员聚集在一起。

意义

AACR 项目 GENIE 现已积累了超过 11 万个肿瘤的数据,使其成为世界上最大的公开可用、临床注释基因组数据存储库之一。GENIE 已成为评估基因组指导临床试验设计、发现癌症亚型驱动因素以及为基因组数据的实际应用提供信息的强大资源。本文在本期“本期要点”特色栏目,第 2007 页中重点介绍。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da09/9437568/ee37c4bb70c5/2044fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da09/9437568/4f7b6652f66c/2044fig1.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da09/9437568/ee37c4bb70c5/2044fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da09/9437568/4f7b6652f66c/2044fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da09/9437568/bf2852e101de/2044fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da09/9437568/f2004fea4ddd/2044fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da09/9437568/e87374bffbb2/2044fig4.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da09/9437568/ee37c4bb70c5/2044fig6.jpg

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