Borch Jensen Martin, Marblestone Adam
Gordian Biotechnology, San Francisco, CA, United States.
Astera Institute, San Francisco, CA, United States.
Front Aging. 2021 Aug 31;2:714926. doi: 10.3389/fragi.2021.714926. eCollection 2021.
Biological aging, and the diseases of aging, occur in a complex environment, driven by multiple interacting processes. A convergence of recently developed technologies has enabled pooled screening: direct administration of a library of different perturbations to a living animal, with a subsequent readout that distinguishes the identity of each perturbation and its effect on individual cells within the animal. Such screens hold promise for efficiently applying functional genomics to aging processes in the full richness of the setting. In this review, we describe the technologies behind pooled screening, including a range of options for delivery, perturbation and readout methods, and outline their potential application to aging and age-related disease. We then suggest how pooled screening, together with emerging innovations in each of its technological underpinnings, could be extended to shed light on key open questions in aging biology, including the mechanisms and limits of epigenetic reprogramming and identifying cellular mediators of systemic signals in aging.
生物衰老以及衰老相关疾病发生在一个由多种相互作用过程驱动的复杂环境中。最近开发的一系列技术的融合实现了汇集筛选:将不同干扰文库直接施用于活体动物,随后进行读数,以区分每种干扰的身份及其对动物体内单个细胞的影响。这种筛选有望在充分丰富的环境中有效地将功能基因组学应用于衰老过程。在本综述中,我们描述了汇集筛选背后的技术,包括一系列递送、干扰和读数方法,并概述了它们在衰老及衰老相关疾病中的潜在应用。然后,我们提出如何将汇集筛选及其每项技术基础中的新兴创新结合起来,以阐明衰老生物学中的关键开放性问题,包括表观遗传重编程的机制和限度,以及识别衰老过程中全身信号的细胞介质。