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构象变化在催化区域负责热诱导的嗜热同型丝氨酸脱氢酶的激活。

Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase.

机构信息

Department of Applied Molecular Chemistry, Graduate School of Industrial Technology, Nihon University, 1-2-1, Izumichou, Narashino, Chiba, 275-8575, Japan.

Department of Biomolecular Science, Graduate School of Science, Toho University, 2-2-1, Miyama, Funabashi, Chiba, 274-8510, Japan.

出版信息

Commun Biol. 2022 Jul 14;5(1):704. doi: 10.1038/s42003-022-03656-7.

Abstract

When overexpressed as an immature enzyme in the mesophilic bacterium Escherichia coli, recombinant homoserine dehydrogenase from the hyperthermophilic archaeon Sulfurisphaera tokodaii (StHSD) was markedly activated by heat treatment. Both the apo- and holo-forms of the immature enzyme were successively crystallized, and the two structures were determined. Comparison among the structures of the immature enzyme and previously reported structures of mature enzymes revealed that a conformational change in a flexible part (residues 160-190) of the enzyme, which encloses substrates within the substrate-binding pocket, is smaller in the immature enzyme. The immature enzyme, but not the mature enzyme, formed a complex that included NADP, despite its absence during crystallization. This indicates that the opening to the substrate-binding pocket in the immature enzyme is not sufficient for substrate-binding, efficient catalytic turnover or release of NADP. Thus, specific conformational changes within the catalytic region appear to be responsible for heat-induced activation.

摘要

当在嗜中温细菌大肠杆菌中作为不成熟酶过表达时,来自超嗜热古菌硫矿硫化叶菌(StHSD)的重组同型丝氨酸脱氢酶经热处理后显著被激活。不成熟酶的脱辅基形式和全酶形式都被成功地结晶,并确定了它们的结构。比较不成熟酶的结构与之前报道的成熟酶的结构表明,酶的柔性部分(残基 160-190)的构象变化较小,该部分将底物封闭在底物结合口袋内。不成熟酶形成了包含 NADP 的复合物,尽管在结晶过程中没有 NADP。这表明,底物结合口袋的开口对于底物结合、高效催化循环或 NADP 的释放来说还不够充分。因此,催化区域内的特定构象变化似乎是导致热诱导激活的原因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e9e/9283420/ead012d6ea62/42003_2022_3656_Fig1_HTML.jpg

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