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基于自然语言处理引擎识别麻醉前病史元素。

Identification of Preanesthetic History Elements by a Natural Language Processing Engine.

机构信息

From the School of Medicine, University of California, San Diego, La Jolla, California.

Division of Perioperative Informatics, Department of Anesthesiology, University of California, San Diego, La Jolla, California.

出版信息

Anesth Analg. 2022 Dec 1;135(6):1162-1171. doi: 10.1213/ANE.0000000000006152. Epub 2022 Jul 15.

Abstract

BACKGROUND

Methods that can automate, support, and streamline the preanesthesia evaluation process may improve resource utilization and efficiency. Natural language processing (NLP) involves the extraction of relevant information from unstructured text data. We describe the utilization of a clinical NLP pipeline intended to identify elements relevant to preoperative medical history by analyzing clinical notes. We hypothesize that the NLP pipeline would identify a significant portion of pertinent history captured by a perioperative provider.

METHODS

For each patient, we collected all pertinent notes from the institution's electronic medical record that were available no later than 1 day before their preoperative anesthesia clinic appointment. Pertinent notes included free-text notes consisting of history and physical, consultation, outpatient, inpatient progress, and previous preanesthetic evaluation notes. The free-text notes were processed by a Named Entity Recognition pipeline, an NLP machine learning model trained to recognize and label spans of text that corresponded to medical concepts. These medical concepts were then mapped to a list of medical conditions that were of interest for a preanesthesia evaluation. For each condition, we calculated the percentage of time across all patients in which (1) the NLP pipeline and the anesthesiologist both captured the condition; (2) the NLP pipeline captured the condition but the anesthesiologist did not; and (3) the NLP pipeline did not capture the condition but the anesthesiologist did.

RESULTS

A total of 93 patients were included in the NLP pipeline input. Free-text notes were extracted from the electronic medical record of these patients for a total of 9765 notes. The NLP pipeline and anesthesiologist agreed in 81.24% of instances on the presence or absence of a specific condition. The NLP pipeline identified information that was not noted by the anesthesiologist in 16.57% of instances and did not identify a condition that was noted by the anesthesiologist's review in 2.19% of instances.

CONCLUSIONS

In this proof-of-concept study, we demonstrated that utilization of NLP produced an output that identified medical conditions relevant to preanesthetic evaluation from unstructured free-text input. Automation of risk stratification tools may provide clinical decision support or recommend additional preoperative testing or evaluation. Future studies are needed to integrate these tools into clinical workflows and validate its efficacy.

摘要

背景

能够实现自动化、支持和简化术前评估流程的方法可以提高资源利用率和效率。自然语言处理(NLP)涉及从非结构化文本数据中提取相关信息。我们描述了一种临床 NLP 管道的利用,该管道旨在通过分析临床记录来识别与术前病史相关的元素。我们假设 NLP 管道将识别出由围手术期提供者捕获的大部分相关病史。

方法

对于每个患者,我们收集了机构电子病历中在其术前麻醉诊所预约前一天内可用的所有相关记录。相关记录包括由病史和体检、咨询、门诊、住院进展以及之前的术前评估记录组成的自由文本记录。自由文本记录由命名实体识别管道处理,这是一种 NLP 机器学习模型,用于识别和标记与医疗概念相对应的文本跨度。然后,将这些医疗概念映射到术前评估中感兴趣的一系列医疗条件列表。对于每种情况,我们计算了以下三种情况下所有患者的时间百分比:(1)NLP 管道和麻醉师都捕获了该情况;(2)NLP 管道捕获了该情况,但麻醉师没有;(3)NLP 管道未捕获该情况,但麻醉师捕获了该情况。

结果

共有 93 名患者被纳入 NLP 管道输入。从这些患者的电子病历中提取了自由文本记录,共提取了 9765 条记录。在特定情况下,NLP 管道和麻醉师在 81.24%的情况下一致认为该情况存在或不存在。在 16.57%的情况下,NLP 管道识别出了麻醉师未记录的信息,而在 2.19%的情况下,NLP 管道未识别出麻醉师审查记录的情况。

结论

在这项概念验证研究中,我们证明了 NLP 的使用从非结构化的自由文本输入中产生了可识别术前评估相关医疗条件的输出。风险分层工具的自动化可能提供临床决策支持或建议进行额外的术前测试或评估。需要进一步的研究将这些工具集成到临床工作流程中并验证其功效。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa17/9640282/3e40f4b30da9/ane-135-1162-g001.jpg

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