Faculty of Applied Sciences, Malek Ashtar University of Technology, Shahin-shahr, Iran.
Mol Divers. 2023 Jun;27(3):1375-1384. doi: 10.1007/s11030-022-10495-5. Epub 2022 Jul 17.
Human African trypanosomiasis (HAT) or sleeping sickness is a protozoan neglected tropical disease, which is the main health worry in more than 20 countries in Africa. A novel approach is presented to predict the antitrypanosomal activity of sesquiterpene lactones (STLs) in terms of biological activity (pIC). The largest reported data set of pIC for Trypanosoma brucei rhodesiense (Tbr) as one form of HAT are used to derive and test the new model. The new model is based on five additive and two non-additive molecular structural parameters in several frameworks where it can be easily applied through a computer code. It is derived and tested based on 125 and 31 experimental data, respectively, with different types of statistical parameters. The high reliability of the novel model is compared with the best available QSAR models, which use "classical" molecular descriptors, and 3D pharmacophore features. The values of R (correlation coefficient), root mean squared error (RMSE), and RMSEP (root mean square error of prediction) of the new model are 0.77, 0.38, and 0.35, respectively. Meanwhile, R, RMSE, and RMSEP of comparative QSAR models based on complex descriptors are in the ranges 0.71-76, 0.46-0.4, and 0.51-0.44, respectively. The predictive results of the novel approach confirm its high simplicity, reliability, precision, accuracy, and goodness-of-fit.
人体感染非洲锥虫病(HAT)或昏睡病是一种原生动物性被忽视的热带病,在非洲的 20 多个国家是主要的健康关注点。本文提出了一种新方法,根据生物活性(pIC)来预测倍半萜内酯(STLs)的抗锥虫活性。使用最大的已报道的 Trypanosoma brucei rhodesiense(Tbr)的 pIC 数据集(HAT 的一种形式)来推导和测试新模型。新模型基于五个加和性和两个非加和性分子结构参数,在几个框架中可以通过计算机代码轻松应用。它是基于 125 个和 31 个实验数据分别推导和测试的,具有不同类型的统计参数。与使用“经典”分子描述符和 3D 药效团特征的最佳现有 QSAR 模型相比,新模型的可靠性较高。新模型的 R(相关系数)、均方根误差(RMSE)和 RMSEP(预测均方根误差)的值分别为 0.77、0.38 和 0.35。同时,基于复杂描述符的比较 QSAR 模型的 R、RMSE 和 RMSEP 的范围分别为 0.71-76、0.46-0.4 和 0.51-0.44。新方法的预测结果证实了其具有高的简单性、可靠性、精度、准确性和拟合优度。