Suppr超能文献

全血微小RNA序列分析及姿势性心动过速综合征青少年特异性miR-21的鉴定

Whole-Blood MicroRNA Sequence Profiling and Identification of Specific miR-21 for Adolescents With Postural Tachycardia Syndrome.

作者信息

Lin Jing, Shen Jie, Liu Juan, Cheng Wenjie, Li Lintian, Jiao Fuyong

机构信息

Key Laboratory for Disease Prevention and Control and Health Promotion of Shaanxi Province, School of Public Health, Xi'an Jiaotong University, Xi'an, China.

Department of Cardiology, National Clinical Research Center for Child Health, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, China.

出版信息

Front Neurosci. 2022 Jun 30;16:920477. doi: 10.3389/fnins.2022.920477. eCollection 2022.

Abstract

OBJECTIVE

The aim of the study was to establish whether whole-blood microRNA (miRNA) profiles differ between postural tachycardia syndrome (POTS) sufferers and control subjects and to identify the miRNA that regulates plasma HS.

STUDY DESIGN

High-throughput sequencing was used to obtain whole-blood miRNA expression profiles for 20 POTS sufferers and 20 normal children.The thresholds for defining differentially expressed miRNAs (DEmiRNAs) were an adjusted DESeq of <0.05 and a log2 fold variation of ≥3. The DEmiRNA target genes were identified using RNAhybrid and miRanda, and only those identified by both were considered. The combined effects of the DEmiRNAs were determined using KEGG pathway analysis. Another 40 POTS and 20 normal patients were used as validation subjects. Plasma HS was determined with a sulfide electrode, and flow-mediated vasodilation (FMD) was performed with a color Doppler ultrasound system. miRNAs were analyzed using qRT-PCR.

RESULTS

Totally, 13 DEmiRNAs were identified through high-throughput sequencing. In the 60-member validation group, the 13 miRNAs were verified again, and it turned out that miR-21 was significantly elevated and could diagnose POTS with a 100% specificity and 92.5% sensitivity. Overall, 198 and 481 genes, respectively, were shown to be targeted by the 13 DEmiRNAs when values of 0.01 and 0.05 were used. The target gene of hsa-miR-21-5p was SP1 when the -value is <0.01. DEmiRNAs were significantly enriched in 36 pathways ( < 0.05), in which PI3K/Akt signaling was closely related to vascular function. In the validation subjects, the plasma HS and FMD were higher in the POTS sufferers ( < 0.05).

CONCLUSION

Elevated whole-blood miR-21 levels serve as an indicator for POTS and may explain the increased plasma HS observed in POTS sufferers.

摘要

目的

本研究旨在确定姿势性心动过速综合征(POTS)患者与对照受试者的全血微小RNA(miRNA)谱是否存在差异,并鉴定调节血浆硫化氢(HS)的miRNA。

研究设计

采用高通量测序技术获取20例POTS患者和20例正常儿童的全血miRNA表达谱。定义差异表达miRNA(DEmiRNA)的阈值为调整后的DESeq值<0.05且log2倍数变化≥3。使用RNAhybrid和miRanda鉴定DEmiRNA靶基因,仅考虑两者均鉴定出的基因。使用KEGG通路分析确定DEmiRNA的联合作用。另外40例POTS患者和20例正常患者作为验证对象。用硫化物电极测定血浆HS,用彩色多普勒超声系统进行血流介导的血管舒张(FMD)。使用qRT-PCR分析miRNA。

结果

通过高通量测序共鉴定出13个DEmiRNA。在60例验证组中,再次验证了这13个miRNA,结果显示miR-21显著升高,诊断POTS的特异性为100%,敏感性为92.5%。总体而言,当使用0.01和0.05的值时,分别有198个和481个基因被证明是这13个DEmiRNA的靶基因。当P值<0.01时,hsa-miR-21-5p的靶基因是SP1。DEmiRNA在36条通路中显著富集(P<0.05),其中PI3K/Akt信号通路与血管功能密切相关。在验证对象中,POTS患者的血浆HS和FMD较高(P<0.05)。

结论

全血miR-21水平升高是POTS的一个指标,可能解释了POTS患者中观察到的血浆HS升高。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/acac/9281551/a2b25e53b944/fnins-16-920477-g0001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验