Xin Rui, Tang Xiao-Mei, Jiang Ying-Jie, Yu Fei, Li Sha, Jia Cheng-You, Wang Gao-Ren, Fu Da, Liu Ji-Bin, Ma Yu-Shui
Department of Nuclear Medicine, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai 200072, China.
Institute of Oncology, Affiliated Tumor Hospital of Nantong University, Nantong 226631, Jiangsu, China.
J Oncol. 2022 Jul 5;2022:3216285. doi: 10.1155/2022/3216285. eCollection 2022.
Colorectal cancer (CRC) includes colon adenocarcinoma (COAD) and rectal adenocarcinoma (READ). Competitive endogenous RNA (ceRNA) is crucial for cancer pathogenesis. Abnormal expression of MYC is generally associated with a poor colon adenocarcinoma prognosis. The present study aimed to identify a novel MYC-associated ceRNA regulatory network and identify potential prognostic markers associated with COAD. We obtained the transcriptome sequencing profiles of 462 COAD cases from the TCGA database and analyzed differentially expressed genes (DEGs) in MYC high expression (MYC) and MYC low expression (Myc) tumors. We identified an important lncRNA, LINC00114, which effectively predicts overall survival and plays a protective role in COAD. Moreover, the LINC00114/miR-216a-5p axis was identified as a clinical prognostic model. The predicted target genes of the LINC00114/miR-216a-5p axis include uromodulin Like 1 (UMODL1) and oncoprotein induced transcript 3 (OIT3), which are closely related to the survival and prognosis of COAD patients. In summary, we constructed a novel ceRNA regulatory network and identified potential biomarkers for the targeted therapy and prognosis of COAD.
结直肠癌(CRC)包括结肠腺癌(COAD)和直肠腺癌(READ)。竞争性内源性RNA(ceRNA)对癌症发病机制至关重要。MYC的异常表达通常与结肠腺癌预后不良相关。本研究旨在识别一个新的与MYC相关的ceRNA调控网络,并确定与COAD相关的潜在预后标志物。我们从TCGA数据库获得了462例COAD病例的转录组测序图谱,并分析了MYC高表达(MYC)和MYC低表达(Myc)肿瘤中的差异表达基因(DEG)。我们鉴定出一个重要的长链非编码RNA,即LINC00114,它能有效预测总生存期,并在COAD中发挥保护作用。此外,LINC00114/miR-216a-5p轴被确定为一种临床预后模型。LINC00114/miR-216a-5p轴的预测靶基因包括尿调节蛋白样1(UMODL1)和癌蛋白诱导转录物3(OIT3),它们与COAD患者的生存和预后密切相关。总之,我们构建了一个新的ceRNA调控网络,并确定了COAD靶向治疗和预后的潜在生物标志物。