Zhang Bo, Zhao Jilong, Liu Bing, Shang Yanan, Chen Fei, Zhang Sidi, He Jiayao, Fan Yumei, Tan Ke
Key Laboratory of Molecular and Cellular Biology of Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang, China.
Key Laboratory of Animal Physiology, Biochemistry and Molecular Biology of Hebei Province, College of Life Sciences, Hebei Normal University, Shijiazhuang, China.
Front Mol Biosci. 2022 Jun 30;9:940575. doi: 10.3389/fmolb.2022.940575. eCollection 2022.
Hepatocellular carcinoma (HCC) is a cancer that is sensitive to ferroptosis, and immunotherapy has emerged as a promising treatment for HCC patients. However, the prognostic potential of ferroptosis-related genes (FRGs) and the effect of ferroptosis on the tumor immune microenvironment in HCC remain largely obscure. Here, we analyzed the expression pattern of FRGs using the TCGA, ICGC and GEO databases. The expression of most FRGs was upregulated in HCC tissues compared with normal liver tissues. Three independent clusters were determined by consensus clustering analysis based on FRG expression in HCC. Cluster 3 exhibited higher expression, unfavorable prognosis, and higher histological tumor stage and grade than clusters 1 and 2. CIBERSORT analysis indicated different infiltrating levels of various immune cells among the three clusters. Moreover, most immune checkpoint genes were highly expressed in cluster 3. Univariate Cox regression and LASSO regression analyses were performed to develop a five FRG-based prognostic risk model using the TCGA and ICGC datasets. Kaplan-Meier analysis and ROC curves were performed to verify the prognostic potential of the risk model. A nomogram containing independent prognostic factors was further developed. Compared with low-risk patients, high-risk HCC patients exhibited worse overall survival (OS). In addition, this risk model was significantly correlated with the infiltrating levels of six major types of immune cells in HCC. Finally, the relationships between the five FRGs and drug sensitivity were investigated. The present study suggests that the five FRGs could elucidate the molecular mechanisms of HCC and lead to a new direction for the improvement of predictive, preventive, and personalized medicine for HCC.
肝细胞癌(HCC)是一种对铁死亡敏感的癌症,免疫疗法已成为治疗HCC患者的一种有前景的方法。然而,铁死亡相关基因(FRGs)的预后潜力以及铁死亡对HCC肿瘤免疫微环境的影响在很大程度上仍不清楚。在此,我们使用TCGA、ICGC和GEO数据库分析了FRGs的表达模式。与正常肝组织相比,大多数FRGs在HCC组织中的表达上调。基于HCC中FRG的表达,通过一致性聚类分析确定了三个独立的聚类。聚类3表现出比聚类1和聚类2更高的表达、不良预后以及更高的组织学肿瘤分期和分级。CIBERSORT分析表明三个聚类中各种免疫细胞的浸润水平不同。此外,大多数免疫检查点基因在聚类3中高表达。使用TCGA和ICGC数据集进行单变量Cox回归和LASSO回归分析,以建立基于五个FRG的预后风险模型。进行Kaplan-Meier分析和ROC曲线以验证风险模型的预后潜力。进一步开发了包含独立预后因素的列线图。与低风险患者相比,高风险HCC患者的总生存期(OS)更差。此外,该风险模型与HCC中六种主要类型免疫细胞的浸润水平显著相关。最后,研究了五个FRG与药物敏感性之间的关系。本研究表明,这五个FRG可以阐明HCC的分子机制,并为改善HCC的预测、预防和个性化医学带来新的方向。